Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq379 129 8e-25 >seq379 Length=54504 Score = 129 bits (142), Expect = 8e-25 Identities = 467/723 (65%), Gaps = 12/723 (2%) Strand=Plus/Minus Query 79863 GAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCA 79922 ||||||||| || | ||||| | ||||| ||||||| || ||||| | | ||| Sbjct 5075 GAACTCGTCACCGTAGACATCCGACAGACCAGGGCATTCGTTGGGGCACATTAGAGTCCA 5016 Query 79923 CTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 79982 || | | | || || | |||||||||||| |||||||| ||||| || | Sbjct 5015 AGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAA 4956 Query 79983 ATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 80042 ||| | | | | || || ||||| ||||| ||| || | |||| ||| | Sbjct 4955 ATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGAC 4896 Query 80043 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTG 80102 || | |||||||| || | ||| ||||| | | | || || || ||||| || ||||| Sbjct 4895 GTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTG 4836 Query 80103 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGT 80162 || | ||| | || ||||| || || |||| | |||||| | || ||| |||||||| Sbjct 4835 GTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCATTGGTACAAGACCGTTGGATGT 4776 Query 80163 ACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAA-TTGATAGACCTA 80221 || || || ||| || || || | || | || || || ||| ||||| | Sbjct 4775 GCCGTTTGTGCCGCCAATGTATGAGCCTGTAGCCCTGATGTTGTGAACATGA-AGACCAA 4717 Query 80222 TTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTA 80281 | || || || | || ||||| | || ||| || | || || ||||| || || | Sbjct 4716 TACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTGTCGTAGATACCATCAA 4657 Query 80282 TGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT----AGTT 80337 |||| ||||| ||||| | | || ||| || | | || || || || Sbjct 4656 TGCTGTCATCCTTCATGGCCACCAAGAAGCAG---GATGCTAGCTG-CGCCTGTGGGGTA 4601 Query 80338 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-GTAGATTGTA 80396 || ||| | || | || || ||||| || || || | || |||| |||| ||||| Sbjct 4600 CCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACATGTAG-TTGTA 4542 Query 80397 CGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACAT 80456 ||||| || |||| ||| || || ||||| || || || |||||||| | ||| Sbjct 4541 TGTCTCGATCGCTGCTTCAATGTCTTCCCCGTGAATGCCGACAGCCACACGCATGATCAT 4482 Query 80457 GTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGT 80516 || || ||||| || | | |||| || ||| | | | ||| ||| |||| ||| Sbjct 4481 CTGTTGCGGTCTCTCGGCAACCTTGCCATCAATTCTGAGAAGGTATGATCGCTCCAGAGT 4422 Query 80517 TTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTT 80576 || || || || || | ||| ||||| || || || | ||| ||||||| || | Sbjct 4421 CTTGAAGCCGAAGTATTGGTAGTTGAAGTCGCGGTCATAGACAATGGCCGAGTTCAGCTC 4362 Query 80577 ATC 80579 ||| Sbjct 4361 ATC 4359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718199747433240