Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq379 129 8e-25
>seq379
Length=54504
Score = 129 bits (142), Expect = 8e-25
Identities = 467/723 (65%), Gaps = 12/723 (2%)
Strand=Plus/Minus
Query 79863 GAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCA 79922
||||||||| || | ||||| | ||||| ||||||| || ||||| | | |||
Sbjct 5075 GAACTCGTCACCGTAGACATCCGACAGACCAGGGCATTCGTTGGGGCACATTAGAGTCCA 5016
Query 79923 CTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 79982
|| | | | || || | |||||||||||| |||||||| ||||| || |
Sbjct 5015 AGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAA 4956
Query 79983 ATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 80042
||| | | | | || || ||||| ||||| ||| || | |||| ||| |
Sbjct 4955 ATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGAC 4896
Query 80043 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTG 80102
|| | |||||||| || | ||| ||||| | | | || || || ||||| || |||||
Sbjct 4895 GTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTG 4836
Query 80103 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGT 80162
|| | ||| | || ||||| || || |||| | |||||| | || ||| ||||||||
Sbjct 4835 GTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCATTGGTACAAGACCGTTGGATGT 4776
Query 80163 ACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAA-TTGATAGACCTA 80221
|| || || ||| || || || | || | || || || ||| ||||| |
Sbjct 4775 GCCGTTTGTGCCGCCAATGTATGAGCCTGTAGCCCTGATGTTGTGAACATGA-AGACCAA 4717
Query 80222 TTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTA 80281
| || || || | || ||||| | || ||| || | || || ||||| || || |
Sbjct 4716 TACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTGTCGTAGATACCATCAA 4657
Query 80282 TGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT----AGTT 80337
|||| ||||| ||||| | | || ||| || | | || || || ||
Sbjct 4656 TGCTGTCATCCTTCATGGCCACCAAGAAGCAG---GATGCTAGCTG-CGCCTGTGGGGTA 4601
Query 80338 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-GTAGATTGTA 80396
|| ||| | || | || || ||||| || || || | || |||| |||| |||||
Sbjct 4600 CCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACATGTAG-TTGTA 4542
Query 80397 CGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACAT 80456
||||| || |||| ||| || || ||||| || || || |||||||| | |||
Sbjct 4541 TGTCTCGATCGCTGCTTCAATGTCTTCCCCGTGAATGCCGACAGCCACACGCATGATCAT 4482
Query 80457 GTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGT 80516
|| || ||||| || | | |||| || ||| | | | ||| ||| |||| |||
Sbjct 4481 CTGTTGCGGTCTCTCGGCAACCTTGCCATCAATTCTGAGAAGGTATGATCGCTCCAGAGT 4422
Query 80517 TTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTT 80576
|| || || || || | ||| ||||| || || || | ||| ||||||| || |
Sbjct 4421 CTTGAAGCCGAAGTATTGGTAGTTGAAGTCGCGGTCATAGACAATGGCCGAGTTCAGCTC 4362
Query 80577 ATC 80579
|||
Sbjct 4361 ATC 4359
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718199747433240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |