Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq3543 98.7 1e-15 >seq3543 Length=3990 Score = 98.7 bits (108), Expect = 1e-15 Identities = 206/302 (68%), Gaps = 4/302 (1%) Strand=Plus/Minus Query 6901 GAAATCGTATATCTTGCCCGAAGCATTCGCTTTGTGCCCGTGAGTGAGATGGCCGCCGCA 6960 ||||| ||| | | ||| |||||||| | | || || ||||| || ||||| Sbjct 1132 GAAATTGTACAGCAAGCCGGAAGCATTAACCGGGCTACCATGTGTGAGGTGTCCGCCAT- 1074 Query 6961 GTCCAAGGA-CATAGCGAGAACCGAATCACCCGGCTTCAGGAGTGCTTGGTAAACTGCCT 7019 | ||||| ||| | || || | ||||| || |||| || | || |||||| Sbjct 1073 GCGCAAGGTTCATGCCCAGTACAGTGTCACCTGGTTTCAAAGCCGCAAGATATACTGCCA 1014 Query 7020 GGTTTGCTTGTGAACCGGAATGAGGTTGAACGTTTGCGAAAT-TGCAACTAAACAGTTCT 7078 ||| ||||||| |||||| ||||||||||| || | | ||| | |||||||||| Sbjct 1013 TGTTCGCTTGTGCACCGGAGTGAGGTTGAACATTCACATGTTCTGCTCC-AAACAGTTCT 955 Query 7079 TTAGCACGCTCAATTGCCAGGTTCTCGATTTCATCGGCTTTTACGCAGCCGCCATAATAC 7138 || ||||| ||| ||| | || ||| | |||| | | | | || || || || || Sbjct 954 TTGGCACGGTCACGTGCAATGTCCTCAACGATATCGACATGTTCACAACCACCGTAGTAA 895 Query 7139 CGTTTGCCCGGATATCCCTCAGCATACTTGTTGGTAAAAATAGAACCCTGTGCTTTCATA 7198 |||||||| ||||| || ||||| || ||||| |||| | ||| || | |||| ||| Sbjct 894 CGTTTGCCTGGATAGCCTTCAGCGTATTTGTTTGTAAGTACAGATCCAAGAGCTTCGATA 835 Query 7199 AC 7200 || Sbjct 834 AC 833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555309808770360