Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq3236 113 7e-21
>seq3236
Length=283868
Score = 113 bits (124), Expect = 7e-21
Identities = 87/101 (86%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||||| | || || |||||||| || |||||||||||||||||
Sbjct 242295 GCCAAGCGTCACCGCAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCAGCTAT 242237
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| || ||||||||||| ||||||||| ||||||
Sbjct 242236 CCGACGTCTCGCGCGTCGTGGTGGTGTCAAGCGTATCTCTG 242196
Score = 91.5 bits (100), Expect = 2e-14
Identities = 119/165 (72%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 16528 CTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTAT 16587
|||| | || |||| ||||||| ||||| ||| | |||| ||||||| || || ||
Sbjct 242138 CTCTCCAGTGATCTACGAAGAGACTCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCAT 242079
Query 16588 CCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATAT 16647
|| ||||| || || ||||||||||| || || |||||||| |||||| | || |
Sbjct 242078 CCGCGATGCCGTCACATACACCGAGCACGCCAAGCGCAAGACTGTTACCTCCCTCGACGT 242019
Query 16648 CGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692
||||| || | || || |||||||| | | || ||||| ||
Sbjct 242018 TGTCTACGCCCTCAAGCGACAAGGCCGCACCCTCTACGGTTTCGG 241974
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79068168064863
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |