Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq379 138 1e-27
>seq379
Length=54504
Score = 138 bits (152), Expect = 1e-27
Identities = 625/978 (64%), Gaps = 26/978 (3%)
Strand=Plus/Minus
Query 62892 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62951
|||| || |||||||| || || || ||||||| | | | | || | || ||||||
Sbjct 5323 GCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCCGGAGCAGAGTACTCCATGATCTCA 5264
Query 62952 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63011
||||| | |||| | |||||| || || | ||| | || || ||||| |||
Sbjct 5263 GTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCG 5204
Query 63012 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63071
|| ||||| || |||||||| || || || || || |||| | || | ||| || | |
Sbjct 5203 GCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATAC 5144
Query 63072 CAGAC-----GA-CTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGT 63125
|| | || | ||| || | | | | | | | |||||| || || |
Sbjct 5143 CATATTTTCTGAGCACGAACCGTC-TCACGGCCCT-----TGCCTTCTCTCTCATAACGC 5090
Query 63126 GTATACAA-TCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGG 63184
|||| || || ||||||||| || | |||| || ||||| ||||| | ||
Sbjct 5089 TCGTACAGCTCCTT-GAACTCGTCACCGTAGACATCCGACAGACCAGGGCATTCGTTGGG 5031
Query 63185 ACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCA 63244
||||| | | ||| |||| | | || || | |||||||||||| ||||||||
Sbjct 5030 GCACATTAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCA 4971
Query 63245 AAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATC 63304
||||| || | ||| | | | | ||| || ||||| ||||| ||| ||
Sbjct 4970 GAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTC 4911
Query 63305 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63364
| |||| ||| | || | |||||||| || | ||| ||||| | | | || || ||
Sbjct 4910 CATGAACTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACG 4851
Query 63365 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 63424
||||| || ||||| || | ||| | || ||||| || || |||| | |||||| |
Sbjct 4850 CTTGTTGCCACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCATTGGTAC 4791
Query 63425 AATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACT 63484
|| |||||| ||| | || || || ||| || || || | || | || ||
Sbjct 4790 AAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTAGCCCTGATGTTGTG 4731
Query 63485 AA-TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGT 63543
|| ||| ||||| || || || || | || ||||| | || ||| || | ||||
Sbjct 4730 AACATGA-AGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTGT 4672
Query 63544 CATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGT 63603
| |||||||| || ||||| ||||| ||||| | | || ||| || | | |
Sbjct 4671 CGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAG---GATGCTAGCT 4615
Query 63604 GACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 63659
| || || || || ||| | || | || || ||||| || || || | ||
Sbjct 4614 G-CGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAAC 4556
Query 63660 GA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGC 63718
|| | |||| ||||| ||||| || |||| || || || ||||| || || ||
Sbjct 4555 GACATGTAG-TTGTATGTCTCGATCGCTGCTTCAATGTCTTCCCCGTGAATGCCGACAGC 4497
Query 63719 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTA 63778
|||||||| | ||| || || ||||| || | | |||| | ||| | | | |||
Sbjct 4496 CACACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCATCAATTCTGAGAAGGTA 4437
Query 63779 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63838
||| |||| ||| || || || || || | ||| ||||| || || || | |||
Sbjct 4436 TGATCGCTCCAGAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCGCGGTCATAGACAAT 4377
Query 63839 AACCGAGTTGAGTTTATC 63856
||||||| || | |||
Sbjct 4376 GGCCGAGTTCAGCTCATC 4359
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622887311413560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |