Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_007022.1
Length=172963
Score E
Sequences producing significant alignments: (Bits) Value
seq3543 109 6e-19
>seq3543
Length=3990
Score = 109 bits (120), Expect = 6e-19
Identities = 181/259 (70%), Gaps = 2/259 (1%)
Strand=Plus/Minus
Query 6963 CCAATACTGAATCGCCTGGACTCAGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAAC 7022
||| ||| | || ||||| ||| |||| | || || || ||| || |||| ||
Sbjct 1058 CCAGTACAGTGTCACCTGGTTTCAAAGCCGCAAGATATACTGCCATGTTCGCTTGTGCAC 999
Query 7023 CGGAATGGGGTTGAACGTTTGCGAAAT-TGCAACTAAACAGTTCTTTAGCACGCTCAATT 7081
|||| || |||||||| || | | ||| | |||||||||||| ||||| ||| |
Sbjct 998 CGGAGTGAGGTTGAACATTCACATGTTCTGCTCC-AAACAGTTCTTTGGCACGGTCACGT 940
Query 7082 GCCAGGTTCTCGATCTCATCGGCTTTTACACAACCGCCGTAATACCGTTTGCCTGGATAT 7141
|| | || ||| | |||| | | | ||||||| ||||| || ||||||||||||||
Sbjct 939 GCAATGTCCTCAACGATATCGACATGTTCACAACCACCGTAGTAACGTTTGCCTGGATAG 880
Query 7142 CCCTCAGCATACTTGTTGGTAAAAATAGAACCTTGCGCTTTCATAACATCATCGGACACA 7201
|| ||||| || ||||| |||| | ||| || | |||| ||||| | ||| ||
Sbjct 879 CCTTCAGCGTATTTGTTTGTAAGTACAGATCCAAGAGCTTCGATAACTGCTTCGCTTACG 820
Query 7202 TAGTTTTCGGATGCAATCA 7220
||| |||||||| ||||
Sbjct 819 ATGTTCTCGGATGCGATCA 801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 553300401968280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |