Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq379 295 2e-74
seq896 93.3 1e-13
seq3554 87.8 5e-12
>seq379
Length=54504
Score = 295 bits (326), Expect = 2e-74
Identities = 1155/1795 (64%), Gaps = 52/1795 (3%)
Strand=Plus/Plus
Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTC-GTATCAATGGTGATATTGTTGA 363449
||||| | ||||| ||||| ||| ||||| |||| | || |||| | ||| ||
Sbjct 4410 TTCGGCTTCAAGACTCTGGAGCGATCATACCT-TCTCAGAATTGATGGCAAGGTTGCCGA 4468
Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509
| ||||| || ||| | |||||||| ||| | || || || | || |||| ||
Sbjct 4469 GAGACCGCAACAGATGATCATGCGTGTGGCTGTCGGCATTCACGGGGAAGACATTGAAGC 4528
Query 363510 CGCGATTGAAACATATAAGCTTCTAAGTGCTCGT----GTA-TTCACGCACGCCACGCCA 363564
||||| || ||||| || ||| || |||| ||| ||||| || || |||||
Sbjct 4529 AGCGATCGAGACATACAA----CTACATG-TCGTTGAAGTACTTCACACATGCTTCGCCA 4583
Query 363565 ACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATG 363624
||| | | || |||||| || | | | ||| | | || ||||| | | |||
Sbjct 4584 ACACTTTTCAGTGCTGGTACCCCACAGGCGCAGCTAGCATCCTGCTTCTTGGTGGCCATG 4643
Query 363625 AAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAG 363684
||||| || ||| || ||||||| ||||| || |||| ||||| | || ||||||
Sbjct 4644 AAGGATGACAGCATTGATGGTATCTACGACACCCTCAAGATATGTGCCATGATCTCCAAG 4703
Query 363685 AATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCG 363743
|| || ||||| |||||| | | ||||| | | || |||| | |||||| |
Sbjct 4704 AACGCTGGCGGTATTGGTCTTCATGTTCACAACATCAGGGCTACAGG-CTCATACATTGG 4762
Query 363744 CGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803
||||||| || || || || || || || ||||| || || | |||| |||||
Sbjct 4763 CGGCACAAACGGCACATCCAACGGTCTTGTACCAATGCTACGAGTCTACAACAACACTGC 4822
Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863
| ||||| ||||||||||| ||||| ||| || ||||| || || || |||||
Sbjct 4823 ACGTTACGTTGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTTGCCATCTACCTTGAGCC 4882
Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923
|| || || | | |||| | || || || || ||| ||||| || ||| |
Sbjct 4883 GTGGCACGCAGACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGT 4942
Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983
||||| || ||| ||||||| || || ||| || | || | |||||| |||| || ||
Sbjct 4943 TCGTGCGCGCGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGA 5002
Query 363984 GGCAGGTAAG-AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTAT 364042
||| | | |||| | || | ||||| ||||||| || ||||| || ||||| |
Sbjct 5003 -ACAGAACGGCACTTGGACTCTAATGTGCCCCAACGAATGCCCTGGTCTGTCGGATGTCT 5061
Query 364043 GGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGA 364102
|||||||| | | || ||||| ||||| || || |||| ||| |||
Sbjct 5062 ACGGTGACGAGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGA 5121
Query 364103 CAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACAC 364162
| ||| || ||||| |||||| ||| || | || |||||| ||||| || ||||
Sbjct 5122 CGGTTCGTGCTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACAC 5181
Query 364163 CCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAA 364222
| | || ||||||| || | |||||||||| ||||||| || | ||||| || |
Sbjct 5182 CTTTCATTCTGTACAAGGACGCCGCCAACCGCAAGAGCAACCAGAAGAATCTTGGCACCA 5241
Query 364223 TTCAGCAGAGC---AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTG 364279
||| ||||| || | || || ||||| || || ||| | ||||| || ||| |
Sbjct 5242 -TCA--AGAGCTCTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCGGATGAGGTCG 5298
Query 364280 CCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT--------AAAAGATGGTAC 364331
| || || || || || ||| | || || || | | || | || |||
Sbjct 5299 CTGTCTGCAATCTGGCTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGT-- 5356
Query 364332 TTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGT 364391
||||||| | || | ||| | || || ||| | | || | || || |||||
Sbjct 5357 TTTTGACTTCAAGAAACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGAC 5416
Query 364392 TATCGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGCC 364450
||||| | || || || || | || || || ||| | | || | || || || |
Sbjct 5417 CATCGAGATCAACTACTACCCGGTACCAGAGGCACGAAAGAGC-AACTTCCGCCACCGAC 5475
Query 364451 CGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTG 364510
| |||||||||||||| | || || ||||| | || || ||| ||| |||| |
Sbjct 5476 CCATTGGTCTTGGTGTCAACGGTCTTGCTGATGCCTTCTTGGCTCTCCGCATGCCATTCG 5535
Query 364511 ATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAA 364570
| |||||||| || | || || | |||| ||||| || || ||| ||| ||
Sbjct 5536 ACTCGCCTGAGGCCAAGGAGCTCAACATCCAGATTTTTGAGACCATCTATCATGCTGCTC 5595
Query 364571 TGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCC 364630
| ||||| || || | || | | || ||| || || || || |
Sbjct 5596 TTGAGGCTTCATGCGAGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTC 5655
Query 364631 CTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGA 364690
| | |||||||| | |||||| || | ||| || || | | || |||
Sbjct 5656 CAGTATCGCAGGGCGAGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCTCTGGG 5715
Query 364691 ACTGGGATACGCTACGTTCCAACGTTAAGA------AGCATGGTACTCGCAACTC---CC 364741
|||||| ||| || ||| | |||| |||| ||| |||||||| |
Sbjct 5716 ACTGGG--CCGC-AC---TCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTC 5769
Query 364742 TCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCT 364801
||||| ||||| ||||| || || || || | |||||| | || ||||||||||
Sbjct 5770 TCGTT---GCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCT 5826
Query 364802 TCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAG 364861
|||| || | |||||||| |||| || || || || | | || || || | ||| |
Sbjct 5827 TCGAGCCATACACAAGCAACATTTACTCTCGTCGTGTGTTGGCTGGCGAGTTCCAGGTCG 5886
Query 364862 TTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGA 364921
| || | || | |||||||| |||||| || |||||| || | ||||||||
Sbjct 5887 TCAACCCATGGCTTCTGAAGGATCTCGTCGACCGTGGCCTGTGGTCAGAGAACATGAAGA 5946
Query 364922 ACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGA 364981
|| |||||||| | ||||| || | ||| ||| || ||||||| || || |
Sbjct 5947 ACCGCATCATCGCTGACAATGGCTCCATTCAGCGCATCCCCAACATTCCAGACGACCTCA 6006
Query 364982 AGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCG 365041
|| | | ||||| ||||| ||||| || | ||| | || | | ||||| || |
Sbjct 6007 AGGCACTCTACAAGACCGTCTGGGAGATCAGCCAGCGTAACATCGTGCAGATGGCTGCTG 6066
Query 365042 ATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCT 365101
| || |||||||||||| ||| || || ||| | ||||| ||||||||
Sbjct 6067 ACCGTGGTGCTTTTATCGACCAGTCTCATAGCTTGAACATCCACATGAAGGAGCCAACCA 6126
Query 365102 CCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
| |||| |||| |||||| ||| || ||||| |||||| ||||| ||
Sbjct 6127 TGGGCAAGATTACCAGCATGCACTTCGCTGGCTGGAAGCTCGGTCTCAAGACTGG 6181
>seq896
Length=97219
Score = 93.3 bits (102), Expect = 1e-13
Identities = 192/281 (68%), Gaps = 6/281 (2%)
Strand=Plus/Plus
Query 111415 AAAATGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTG 111474
|||| || | || |||||||| || || || || || || ||||| || || || || |
Sbjct 62606 AAAACGTCCACATCTGGGATGGTAACGGTTCGCGAGAATTCCTAGACTCCGTAGGCCTAG 62665
Query 111475 TCGACAACGA--AGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGG 111532
||| ||| || ||| || ||||| || || ||||| ||||||||||| ||||||||
Sbjct 62666 A--ACACCGAGTAGTAGGCGACCTCGGCCCCGTCTACGGGTTTCAATGGCGGCACTTTGG 62723
Query 111533 TGCAGACTACAAAACCATGCACGACTCATATGATTCACAGGGAACTGATCAATTA-CAGA 111591
|| || ||||||||| |||||| || || || || ||| || | ||
Sbjct 62724 AGCCGAATACAAAACCTGCCACGACGACTACACCGGCCAAGGCGTCGACCAACTAGCCGA 62783
Query 111592 ATGTCATTGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGA 111651
| || || | || | ||||||||||| | |||||| || || | ||||| ||||
Sbjct 62784 A-GTAATCCACAAACTCAAGAACAACCCTTATGATCGTCGGATAATATTAAGTGCCTGGA 62842
Query 111652 ACCCAAATGCATTGGAAAAAATGGCACTTCCACCATGTCAT 111692
|||| | | | |||||||| || ||||| || |||
Sbjct 62843 ACCCCGCAGACCTTAAGAAAATGGCCCTCCCACCCTGCCAT 62883
>seq3554
Length=66956
Score = 87.8 bits (96), Expect = 5e-12
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 65871 GTTACGAATCGTTCCGTCATAATTGCACATATTATCTTCACTTGCCTTTACAAGACAACG 65930
|||||| | || | ||| || ||| ||| ||||| ||||| || |||| |||
Sbjct 35824 GTTACGCACAGTGCTGTCGTACTTGATCATGACTTCTTCCAAAGCCTTCACTAGACGACG 35765
Query 65931 CTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCCCGGA 65990
||||||||||||| | | |||||| || || |||||||||| |||||||||||| ||
Sbjct 35764 CTGGATGTAACCAGTCTCTGCAGTCTTGACAGCGGTATCAATGAGACCTTCACGACCACC 35705
Query 65991 CATTGCAGAAAAGAAAAACTC 66011
||| || ||||| |||||
Sbjct 35704 CATGGCGTGGAAGAAGAACTC 35684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303225166314362
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |