Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq379 170 2e-37 seq260 134 1e-26 seq3236 105 6e-18 seq2864 102 8e-17 >seq379 Length=54504 Score = 170 bits (188), Expect = 2e-37 Identities = 918/1445 (64%), Gaps = 33/1445 (2%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| |||||||| |||||||||||||| | || | ||| ||| | || Sbjct 5890 TTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATGGC 5831 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || |||||||| ||||| ||| || | ||||| || || ||||| ||| || Sbjct 5830 TCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAACG 5771 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || ||||||| ||||||| ||| | |||| || | |||| ||||| Sbjct 5770 AGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCCAG 5711 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCT-CGCTGGCGGGGCT 145296 || || || || | |||||||||||||||| | ||||| || | | || Sbjct 5710 AGGTCGGTAGGAGTCTTGCCCCACATGTCGTACTGGAGCTCGCCCTGCGAT-ACTGGAGA 5652 Query 145297 GCCTTGAAAGGAACTGTAACTGCCCCAAGTT-TTGGCGAGCTCGCAACTCGCCTCCAGAG 145355 |||| | | | |||| | || | || | || |||||||| ||||| |||| Sbjct 5651 GCCTGGGTATGTCTCGTAA-GGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAG 5593 Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGT 145415 | | ||| || ||||| ||| || |||||||| | | || ||| ||| Sbjct 5592 CAGCATGATAGATGGTCTCAAAAATCTGGATGTTGAGCTCCTTGGCCTCAGGCGAGTCGA 5533 Query 145416 ACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCC 145475 | |||||||| || | || ||||| || || || | | || | || ||||| | Sbjct 5532 ATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTC 5473 Query 145476 GATGTTTCATGTTGCTCATCCTCGCCGACTCG-ATAGGATATCGATTACGGTCGATAATT 145534 | || | ||||||| | | ||| || | | || || || ||||| | Sbjct 5472 GGTGGCGGAAGTTGCTCTTTCGTGCC-TCTGGTACCGGGTAGTAGTTGATCTCGATGGTC 5414 Query 145535 TTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGA 145594 || |||| ||| || || || || || | | | | || | |||||||| | Sbjct 5413 TTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAA---A 5357 Query 145595 GCCTCG---TCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCC 145651 ||||| || | | | || || | | || | ||| |||| ||| || || || Sbjct 5356 ACCTCGTTCTCGATGTCGACGTAGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCG 5297 Query 145652 GTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTT 145711 ||| || | | ||| | | |||||| | ||||||||| | |||||||| Sbjct 5296 ACCTCATCCGGAGCAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTG 5237 Query 145712 CCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCG 145771 || ||||| | ||| || || || | |||| ||||||||||| || ||| | ||| | Sbjct 5236 CCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTG 5177 Query 145772 CCAGTCTCCACCTGCGTCTCCACGATA--AAACGGTGCAAGTCCTGCGCACGCACCTGCT 145829 || ||||| ||||| ||| | ||| | || | | | ||| ||||| ||| || Sbjct 5176 CCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCAT--ATTTTCTGAGCACGAACCGTCT 5119 Query 145830 GCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGC 145889 || ||| ||| || || | ||| ||||||| ||| || ||||||| Sbjct 5118 CACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAGA 5059 Query 145890 AATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGA 145949 ||| ||||| || || || | |||||| ||||| || | ||| |||||| | || Sbjct 5058 CATCCGACAGACCAGGGCATTCGTTGGGGCACATTAGAGTCCAAGTGCCGTTCTGTTCGA 4999 Query 145950 CGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAAT 146009 | |||| |||||| | ||| || | ||| || ||||| | ||| |||||||| | | | Sbjct 4998 CACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGC-ACGAACT 4940 Query 146010 CCTCAGCACCCATGTTTCGCTTCAAATT--AAGCACACTATAGATGTCCGCGTGCCACGG 146067 || ||||| ||| || | | | || || || ||| ||||||||||| Sbjct 4939 TCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCAT-GACGTCTGCGTGCCACGG 4881 Query 146068 TTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACGTAC 146124 |||| |||| ||| | || ||| || |||||||||||||| |||| |||| | Sbjct 4880 CTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGTGC 4821 Query 146125 CATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAGAGTT 146184 ||||||| |||| || | ||| || | | ||| ||| | |||||| || | Sbjct 4820 AGTGTTGTTGTAGACTCGTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCC 4761 Query 146185 TATTCTGGTGCCGCGGGAGCGC--ACGCAATGAACATTCACGCCGAGACCGCCGCCGTAC 146242 || | || | | ||| | | | ||||||| | || | |||||| ||| | Sbjct 4760 AATGTATGAGC--CTGTAGCCCTGATGTTGTGAACATGAAGACCAATACCGCCAGCGTTC 4703 Query 146243 TTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC--GCTTC 146300 ||||| || ||| || ||| || |||||||| || |||||||| || |||| Sbjct 4702 TTGGAGATCATGGCACATATCTTGAGGGTGTCGTAGATACCATCAATGCTGTCATCCTTC 4643 Query 146301 GAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAACG 146360 ||| | | || ||||| || | ||||||| || || || || ||| | | Sbjct 4642 --ATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGGGTACCAGCACTGAAAAGTG 4585 Query 146361 TCGGGCTCGCGTGCGTAAACATTTTTCGGC-TCATCATCCGATACGTTTCGATAGCGTCT 146419 | || || || || || | ||| | ||| || || ||||| || || Sbjct 4584 TTGGCGAAGCATGTGTGAA-GTACTTCAACGACATGTAGTTGTATGTCTCGATCGCTGCT 4526 Query 146420 TGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCTCC 146479 | |||||| || || |||||||| | ||| || ||||||| ||| ||||| || | ||| Sbjct 4525 TCAATGTCTTCCCCGTGAATGCCGACAGCCACACGCATGATCATCTGTTGCGGTCTCTCG 4466 Query 146480 GCCAC 146484 || || Sbjct 4465 GCAAC 4461 >seq260 Length=339642 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| || || | ||||| || || || |||||||| ||| | Sbjct 135614 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAC 135673 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| |||||||||||||| | || | ||||||||||| || ||| Sbjct 135674 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 135733 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | || | || ||| ||||||||| Sbjct 135734 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACC 135793 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || ||||| ||||| || ||||| |||||||| Sbjct 135794 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 135840 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||||||||| || || | || |||||||| || ||||||||||| Sbjct 135385 GCCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGA 135444 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || |||||| ||||||||||| ||| |||| | ||||||||||||||| || Sbjct 135445 AAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 135504 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || ||||| | || | || |||| || || | Sbjct 135505 GATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCAC 135564 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || ||||| || || || |||||||| ||||| Sbjct 135565 TTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 135612 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | || |||||| || |||||||| ||| | Sbjct 135842 CCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 135901 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||||||| | || || || |||||||| || || Sbjct 135902 AGGGTGCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGA 135961 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || ||| || ||| | | || | || |||| ||||| | Sbjct 135962 ATGCCTTCCTTATCCTGGATCTTGCTCTTCACATTATCGATGGTGTCGGACGACTCAACC 136021 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 |||| ||||| ||| || ||||| Sbjct 136022 TCGAGGGTAATGGTCTTGCCGGT 136044 >seq3236 Length=283868 Score = 105 bits (116), Expect = 6e-18 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | || | ||| |||||| ||||||||||| ||| Sbjct 201577 CCACCACGCAGACGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAG 201518 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| || |||||||||||||| || Sbjct 201517 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGA 201458 Query 131128 ATTCCTTCTTTGTCGGTG 131145 ||||| || ||||| ||| Sbjct 201457 ATTCCCTCCTTGTCTGTG 201440 >seq2864 Length=266724 Score = 102 bits (112), Expect = 8e-17 Identities = 133/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 131042 ACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGT 131101 || |||| || ||||| || ||| | |||||| ||||| | |||||| || ||| Sbjct 247963 ACACCTTCTGGATGTTATAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGA 248022 Query 131102 AGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCT 131161 |||| ||||||||||||||||| |||||||| || ||||| ||| || ||||| | Sbjct 248023 AGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACAT 248082 Query 131162 GCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTA 131221 || | || ||| | ||||||| |||| || | ||| || || || || || |||| Sbjct 248083 TGTCGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTA 248142 Query 131222 CGAA 131225 |||| Sbjct 248143 CGAA 248146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471967421869440