Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq379 170 2e-37
seq260 134 1e-26
seq3236 105 6e-18
seq2864 102 8e-17
>seq379
Length=54504
Score = 170 bits (188), Expect = 2e-37
Identities = 918/1445 (64%), Gaps = 33/1445 (2%)
Strand=Plus/Minus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||||||||| |||||||| |||||||||||||| | || | ||| ||| | ||
Sbjct 5890 TTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATGGC 5831
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || |||||||| ||||| ||| || | ||||| || || ||||| ||| ||
Sbjct 5830 TCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAACG 5771
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| | || ||||||| ||||||| ||| | |||| || | |||| |||||
Sbjct 5770 AGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCCAG 5711
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCT-CGCTGGCGGGGCT 145296
|| || || || | |||||||||||||||| | ||||| || | | ||
Sbjct 5710 AGGTCGGTAGGAGTCTTGCCCCACATGTCGTACTGGAGCTCGCCCTGCGAT-ACTGGAGA 5652
Query 145297 GCCTTGAAAGGAACTGTAACTGCCCCAAGTT-TTGGCGAGCTCGCAACTCGCCTCCAGAG 145355
|||| | | | |||| | || | || | || |||||||| ||||| ||||
Sbjct 5651 GCCTGGGTATGTCTCGTAA-GGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAG 5593
Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGT 145415
| | ||| || ||||| ||| || |||||||| | | || ||| |||
Sbjct 5592 CAGCATGATAGATGGTCTCAAAAATCTGGATGTTGAGCTCCTTGGCCTCAGGCGAGTCGA 5533
Query 145416 ACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCC 145475
| |||||||| || | || ||||| || || || | | || | || ||||| |
Sbjct 5532 ATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTC 5473
Query 145476 GATGTTTCATGTTGCTCATCCTCGCCGACTCG-ATAGGATATCGATTACGGTCGATAATT 145534
| || | ||||||| | | ||| || | | || || || ||||| |
Sbjct 5472 GGTGGCGGAAGTTGCTCTTTCGTGCC-TCTGGTACCGGGTAGTAGTTGATCTCGATGGTC 5414
Query 145535 TTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGA 145594
|| |||| ||| || || || || || | | | | || | |||||||| |
Sbjct 5413 TTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAA---A 5357
Query 145595 GCCTCG---TCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCC 145651
||||| || | | | || || | | || | ||| |||| ||| || || ||
Sbjct 5356 ACCTCGTTCTCGATGTCGACGTAGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCG 5297
Query 145652 GTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTT 145711
||| || | | ||| | | |||||| | ||||||||| | ||||||||
Sbjct 5296 ACCTCATCCGGAGCAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTG 5237
Query 145712 CCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCG 145771
|| ||||| | ||| || || || | |||| ||||||||||| || ||| | ||| |
Sbjct 5236 CCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTG 5177
Query 145772 CCAGTCTCCACCTGCGTCTCCACGATA--AAACGGTGCAAGTCCTGCGCACGCACCTGCT 145829
|| ||||| ||||| ||| | ||| | || | | | ||| ||||| ||| ||
Sbjct 5176 CCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCAT--ATTTTCTGAGCACGAACCGTCT 5119
Query 145830 GCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGC 145889
|| ||| ||| || || | ||| ||||||| ||| || |||||||
Sbjct 5118 CACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAGA 5059
Query 145890 AATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGA 145949
||| ||||| || || || | |||||| ||||| || | ||| |||||| | ||
Sbjct 5058 CATCCGACAGACCAGGGCATTCGTTGGGGCACATTAGAGTCCAAGTGCCGTTCTGTTCGA 4999
Query 145950 CGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAAT 146009
| |||| |||||| | ||| || | ||| || ||||| | ||| |||||||| | | |
Sbjct 4998 CACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGC-ACGAACT 4940
Query 146010 CCTCAGCACCCATGTTTCGCTTCAAATT--AAGCACACTATAGATGTCCGCGTGCCACGG 146067
|| ||||| ||| || | | | || || || ||| |||||||||||
Sbjct 4939 TCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCAT-GACGTCTGCGTGCCACGG 4881
Query 146068 TTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACGTAC 146124
|||| |||| ||| | || ||| || |||||||||||||| |||| |||| |
Sbjct 4880 CTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGTGC 4821
Query 146125 CATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAGAGTT 146184
||||||| |||| || | ||| || | | ||| ||| | |||||| || |
Sbjct 4820 AGTGTTGTTGTAGACTCGTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCC 4761
Query 146185 TATTCTGGTGCCGCGGGAGCGC--ACGCAATGAACATTCACGCCGAGACCGCCGCCGTAC 146242
|| | || | | ||| | | | ||||||| | || | |||||| ||| |
Sbjct 4760 AATGTATGAGC--CTGTAGCCCTGATGTTGTGAACATGAAGACCAATACCGCCAGCGTTC 4703
Query 146243 TTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC--GCTTC 146300
||||| || ||| || ||| || |||||||| || |||||||| || ||||
Sbjct 4702 TTGGAGATCATGGCACATATCTTGAGGGTGTCGTAGATACCATCAATGCTGTCATCCTTC 4643
Query 146301 GAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAACG 146360
||| | | || ||||| || | ||||||| || || || || ||| | |
Sbjct 4642 --ATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGGGTACCAGCACTGAAAAGTG 4585
Query 146361 TCGGGCTCGCGTGCGTAAACATTTTTCGGC-TCATCATCCGATACGTTTCGATAGCGTCT 146419
| || || || || || | ||| | ||| || || ||||| || ||
Sbjct 4584 TTGGCGAAGCATGTGTGAA-GTACTTCAACGACATGTAGTTGTATGTCTCGATCGCTGCT 4526
Query 146420 TGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCTCC 146479
| |||||| || || |||||||| | ||| || ||||||| ||| ||||| || | |||
Sbjct 4525 TCAATGTCTTCCCCGTGAATGCCGACAGCCACACGCATGATCATCTGTTGCGGTCTCTCG 4466
Query 146480 GCCAC 146484
|| ||
Sbjct 4465 GCAAC 4461
>seq260
Length=339642
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| ||||| || || | ||||| || || || |||||||| ||| |
Sbjct 135614 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAC 135673
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||||| |||||||||||||| | || | ||||||||||| || |||
Sbjct 135674 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 135733
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| ||| ||||| | || | || ||| |||||||||
Sbjct 135734 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACC 135793
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | ||| || ||||| ||||| || ||||| ||||||||
Sbjct 135794 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 135840
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| || || | ||||||||| || || | || |||||||| || |||||||||||
Sbjct 135385 GCCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGA 135444
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || || |||||| ||||||||||| ||| |||| | ||||||||||||||| ||
Sbjct 135445 AAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 135504
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| ||| || ||||| | || | || |||| || || |
Sbjct 135505 GATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCAC 135564
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | || || ||||| || || || |||||||| |||||
Sbjct 135565 TTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 135612
Score = 100 bits (110), Expect = 3e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | ||| | || |||||| || |||||||| ||| |
Sbjct 135842 CCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 135901
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| ||||||||||||||| | || || || |||||||| || ||
Sbjct 135902 AGGGTGCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGA 135961
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| || || ||| || ||| | | || | || |||| ||||| |
Sbjct 135962 ATGCCTTCCTTATCCTGGATCTTGCTCTTCACATTATCGATGGTGTCGGACGACTCAACC 136021
Query 131188 TCGACGGTAACGGTTTTACCGGT 131210
|||| ||||| ||| || |||||
Sbjct 136022 TCGAGGGTAATGGTCTTGCCGGT 136044
>seq3236
Length=283868
Score = 105 bits (116), Expect = 6e-18
Identities = 106/138 (77%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| || || | || | ||| |||||| ||||||||||| |||
Sbjct 201577 CCACCACGCAGACGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAG 201518
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| ||||||||||| ||| |||| || |||||||||||||| ||
Sbjct 201517 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGA 201458
Query 131128 ATTCCTTCTTTGTCGGTG 131145
||||| || ||||| |||
Sbjct 201457 ATTCCCTCCTTGTCTGTG 201440
>seq2864
Length=266724
Score = 102 bits (112), Expect = 8e-17
Identities = 133/184 (72%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 131042 ACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGT 131101
|| |||| || ||||| || ||| | |||||| ||||| | |||||| || |||
Sbjct 247963 ACACCTTCTGGATGTTATAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGA 248022
Query 131102 AGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCT 131161
|||| ||||||||||||||||| |||||||| || ||||| ||| || ||||| |
Sbjct 248023 AGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACAT 248082
Query 131162 GCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTA 131221
|| | || ||| | ||||||| |||| || | ||| || || || || || ||||
Sbjct 248083 TGTCGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTA 248142
Query 131222 CGAA 131225
||||
Sbjct 248143 CGAA 248146
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471967421869440
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