Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq6171 140 2e-28
seq3971 134 9e-27
>seq6171
Length=241074
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 43883 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 43942
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 43943 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 43977
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 52491 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 52550
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 52551 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 52585
>seq3971
Length=130023
Score = 134 bits (148), Expect = 9e-27
Identities = 200/284 (70%), Gaps = 0/284 (0%)
Strand=Plus/Plus
Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATT 6260
|||||||||||||| ||| ||||||| ||||||| ||||| ||||| ||||||||
Sbjct 34891 TTCTACCGCTACAAGATGGAGCGCATCCAGTCCAAGGTAGAGGGGAAGGGTAACGGTATC 34950
Query 6261 AAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTAC 6320
|| || ||| | |||||| || | | |||||| | ||||| ||||| | | |||
Sbjct 34951 AAGACTGTCGTCGTCAACCTGGCCAACGTCGCTTACCAGCTCGCCCGCCCGCCAAGCTAT 35010
Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380
| || || || || | ||| || ||||| ||||| | |||| | ||| ||||
Sbjct 35011 GTCATCAAGTACTTTGGTTTCGAGCTCGGCGCCCAGACCAATATTGACCCCAAGGACGAC 35070
Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTT 6440
|||| ||| | ||||| | ||| | || ||||| |||| |||| || || |||||
Sbjct 35071 CGCTGGATCATCAACGGTGCACATGAGGCTACCAAGTTGCAAGACTACCTCGATGGCTTC 35130
Query 6441 ATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGAC 6484
|| |||||| || || || ||| ||| | ||||| |||||
Sbjct 35131 ATCAACAAGTTCGTCCTCTGCAAGGACTGCAAGAACCCCGAGAC 35174
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334915804038221
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |