Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq2864 105 1e-17
seq2731 95.1 2e-14
>seq2864
Length=266724
Score = 105 bits (116), Expect = 1e-17
Identities = 139/190 (73%), Gaps = 2/190 (1%)
Strand=Plus/Minus
Query 279378 GCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGTGGCAACCGG 279437
|||||||||| ||||| ||||| ||| || | ||| |||||||||| | ||
Sbjct 23728 GCATATGGTGCAAAGATCCTGCTCAACCAGACACATCTCCGACTCAAGCGTGGTCAGCGT 23669
Query 279438 TATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCCATTGCAAAC 279497
|||||||| |||||||||| ||| | || |||| ||| || ||||||||||| |||
Sbjct 23668 TATGGTCTTCTCGGTCCCAACGGATCTGGCAAGACCACGCTCATGCGCGCCATCAACAAC 23609
Query 279498 GGTCAGCTGGAAGGATTTCCTAACGCA-TCTGAGGTAAGGACAGTGTATGTAGAGCACGA 279556
| ||| | || ||||| || || ||| ||||| | ||| ||||| || ||||||||
Sbjct 23608 GAGCAGGTCGAGGGATTCCCCAA-GCAGGACGAGGTTAAGACCGTGTACGTCGAGCACGA 23550
Query 279557 CATCGACTCC 279566
| | || |||
Sbjct 23549 CTTGGATTCC 23540
Score = 102 bits (112), Expect = 2e-16
Identities = 165/232 (71%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 280161 TCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTG 280220
|| || |||| |||||||| || |||||||| || |||||||| || |||| ||||||
Sbjct 22945 TCTCGTATTGCCGTCATTGGGCCAAATGGTGCCGGCAAGTCTACTCTCGTCAACGTCCTG 22886
Query 280221 ACTGGCGAGACCCAGGCC-ACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGC 280279
||||| ||| | || || |||| || ||| | |||| ||||| || || ||
Sbjct 22885 ACTGGTGAG-CTCATCCCGACTGCCGGCGACGTCTACCAGCACGAGAACATCCGTATCGC 22827
Query 280280 TTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCA 280339
||| || |||||||||||| |||||||| |||| || || | ||| || | |
Sbjct 22826 CTACATCAAGCAGCACGCTTTCGCGCACATCGACCACCATCTCGAGAAGACCCCGTCCGA 22767
Query 280340 ATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390
|||||| |||||||| | | || | ||| |||||| ||| | |||| ||
Sbjct 22766 ATACATCCAGTGGCGGT-TCCAGACTGGTGAGGATCGTGAGACCATGGACCG 22716
Score = 91.5 bits (100), Expect = 3e-13
Identities = 122/167 (73%), Gaps = 2/167 (1%)
Strand=Plus/Minus
Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731
|||| | ||||||||| | ||| | ||||||| || || |||||||| || |
Sbjct 22389 CCAACTTCGGTCTGGACGCTGAGCTCGTGTCTCACTCCCGTATGAAGGGTCTTTCCGGCG 22330
Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790
| ||| ||||| | || ||| ||| |||| |||||| | |||||| ||||||||
Sbjct 22329 GTCAGCGTGTCAAGGTCGTGCTCGCCGCATGCTC-GTGGCAGCGTCCTCACTTGATCGTT 22271
Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCT 280837
|| |||||||| ||||||||||| ||||| || ||||| |||||
Sbjct 22270 CTTGACGAGCCAACCAACTATCTCGACCGTGACTCACTGGGTGCTCT 22224
>seq2731
Length=251915
Score = 95.1 bits (104), Expect = 2e-14
Identities = 133/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233
||||||| ||||||||||| || ||||| || | ||||| ||| ||||||||||| |
Sbjct 69116 TCATTGGGCCCAATGGTGCTGGCAAGTCGACGTTGATCAAGGTCTTGACTGGCGAGGTCA 69175
Query 280234 AGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGC 280293
|| || || || ||| ||||||||| |||| || | ||| || ||||
Sbjct 69176 TTCCCCAAGAAGGCAAGGTCGAGAAACATCCCAACTTGCGAATTGGCTACATCAAGCAGC 69235
Query 280294 ACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGC 280353
|||| | | ||| | |||| || || || | ||| || ||||| ||| |||||||||
Sbjct 69236 ACGCGCTTGAGCACGTGGAGATGCATCTCGAAAAGACGCCCAACCAGTACCTTCAGTGGC 69295
Query 280354 GCTATGC 280360
| |||||
Sbjct 69296 GATATGC 69302
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027735515998131
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |