Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq2864 105 1e-17 seq2731 95.1 2e-14 >seq2864 Length=266724 Score = 105 bits (116), Expect = 1e-17 Identities = 139/190 (73%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 279378 GCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGTGGCAACCGG 279437 |||||||||| ||||| ||||| ||| || | ||| |||||||||| | || Sbjct 23728 GCATATGGTGCAAAGATCCTGCTCAACCAGACACATCTCCGACTCAAGCGTGGTCAGCGT 23669 Query 279438 TATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCCATTGCAAAC 279497 |||||||| |||||||||| ||| | || |||| ||| || ||||||||||| ||| Sbjct 23668 TATGGTCTTCTCGGTCCCAACGGATCTGGCAAGACCACGCTCATGCGCGCCATCAACAAC 23609 Query 279498 GGTCAGCTGGAAGGATTTCCTAACGCA-TCTGAGGTAAGGACAGTGTATGTAGAGCACGA 279556 | ||| | || ||||| || || ||| ||||| | ||| ||||| || |||||||| Sbjct 23608 GAGCAGGTCGAGGGATTCCCCAA-GCAGGACGAGGTTAAGACCGTGTACGTCGAGCACGA 23550 Query 279557 CATCGACTCC 279566 | | || ||| Sbjct 23549 CTTGGATTCC 23540 Score = 102 bits (112), Expect = 2e-16 Identities = 165/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 280161 TCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTG 280220 || || |||| |||||||| || |||||||| || |||||||| || |||| |||||| Sbjct 22945 TCTCGTATTGCCGTCATTGGGCCAAATGGTGCCGGCAAGTCTACTCTCGTCAACGTCCTG 22886 Query 280221 ACTGGCGAGACCCAGGCC-ACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGC 280279 ||||| ||| | || || |||| || ||| | |||| ||||| || || || Sbjct 22885 ACTGGTGAG-CTCATCCCGACTGCCGGCGACGTCTACCAGCACGAGAACATCCGTATCGC 22827 Query 280280 TTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCA 280339 ||| || |||||||||||| |||||||| |||| || || | ||| || | | Sbjct 22826 CTACATCAAGCAGCACGCTTTCGCGCACATCGACCACCATCTCGAGAAGACCCCGTCCGA 22767 Query 280340 ATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390 |||||| |||||||| | | || | ||| |||||| ||| | |||| || Sbjct 22766 ATACATCCAGTGGCGGT-TCCAGACTGGTGAGGATCGTGAGACCATGGACCG 22716 Score = 91.5 bits (100), Expect = 3e-13 Identities = 122/167 (73%), Gaps = 2/167 (1%) Strand=Plus/Minus Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731 |||| | ||||||||| | ||| | ||||||| || || |||||||| || | Sbjct 22389 CCAACTTCGGTCTGGACGCTGAGCTCGTGTCTCACTCCCGTATGAAGGGTCTTTCCGGCG 22330 Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790 | ||| ||||| | || ||| ||| |||| |||||| | |||||| |||||||| Sbjct 22329 GTCAGCGTGTCAAGGTCGTGCTCGCCGCATGCTC-GTGGCAGCGTCCTCACTTGATCGTT 22271 Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCT 280837 || |||||||| ||||||||||| ||||| || ||||| ||||| Sbjct 22270 CTTGACGAGCCAACCAACTATCTCGACCGTGACTCACTGGGTGCTCT 22224 >seq2731 Length=251915 Score = 95.1 bits (104), Expect = 2e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233 ||||||| ||||||||||| || ||||| || | ||||| ||| ||||||||||| | Sbjct 69116 TCATTGGGCCCAATGGTGCTGGCAAGTCGACGTTGATCAAGGTCTTGACTGGCGAGGTCA 69175 Query 280234 AGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGC 280293 || || || || ||| ||||||||| |||| || | ||| || |||| Sbjct 69176 TTCCCCAAGAAGGCAAGGTCGAGAAACATCCCAACTTGCGAATTGGCTACATCAAGCAGC 69235 Query 280294 ACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGC 280353 |||| | | ||| | |||| || || || | ||| || ||||| ||| ||||||||| Sbjct 69236 ACGCGCTTGAGCACGTGGAGATGCATCTCGAAAAGACGCCCAACCAGTACCTTCAGTGGC 69295 Query 280354 GCTATGC 280360 | ||||| Sbjct 69296 GATATGC 69302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027735515998131