Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq6817 286 7e-72
seq379 201 2e-46
seq3382 87.8 3e-12
>seq6817
Length=715036
Score = 286 bits (316), Expect = 7e-72
Identities = 582/854 (68%), Gaps = 34/854 (4%)
Strand=Plus/Minus
Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGA- 42367
|||||||| ||||| || ||| |||||| || ||||||||||| ||| | |||||
Sbjct 197062 ATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTGTCGAAGGAT 197003
Query 42368 ---CACGGCCGGCT---GGGAGTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACAT 42421
|||| | || | || ||| | | |||||| || ||| || | || |
Sbjct 197002 CTCCACGACTGGAACAAGCGACTCAACGACGACGAACGA----TTCTTCATCTCACACGT 196947
Query 42422 ACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCAT 42481
|| || ||||||||||| || || ||||| ||||| |||||||| | | | ||||
Sbjct 196946 CCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAGCGCTTCAG 196887
Query 42482 GAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAA 42541
||||||||| | ||||| || |||||||||||||||||||| || |||||
Sbjct 196886 CTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGATGGAGAA 196827
Query 42542 CGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCG 42601
| | ||||| ||| || || || || | || |||||| || || ||||
Sbjct 196826 CATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAGCCAAAGCAGCG 196767
Query 42602 TAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGC 42661
| |||||||| ||||| || | || || |||||| | |||||| ||||||||
Sbjct 196766 AACATACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGGCTGACTGGGC 196707
Query 42662 GCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCG 42720
| | ||||| | | || | | || |||| | | || | || ||| |||
Sbjct 196706 GTTGCGATGGATTTCT-GACAAGAACTCGACATTCGCCCTCCGTCTCATCGCATTTGCCG 196648
Query 42721 CCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-G 42779
|||| ||||||||||||||||| || | || || | ||||||||||| ||| | |
Sbjct 196647 CCGTTGAGGGCATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTGAAGAAACGTG 196588
Query 42780 GTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCAT 42839
|| || ||| |||| ||||| ||||||||||| |||||| | | || ||||| ||||
Sbjct 196587 GTCTC-ATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAGGGCATGCAC 196529
Query 42840 AGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGG 42899
| ||||| |||||||| ||||||||| || || | | ||||||| ||| |
Sbjct 196528 ACAGACTTCGCCTGCCTTCTGTTCTCG---CATCTGAAGAACAAGCCGAACCAGGCCCTT 196472
Query 42900 GTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTG 42959
|| | | |||||| || |||||||| ||| ||| |||||||| | || || ||||
Sbjct 196471 GTGCAGAGCATCATTACCGAGGCCGTCACGATTGAGCAGGAGTTCTTGAC--AGACGCTC 196414
Query 42960 C-CCGTGTCC-CTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCG 43017
|| || || | || |||||| | |||||||| | ||||| | | |||||
Sbjct 196413 TTCCATGCAAGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAATTCGTCG 196354
Query 43018 CCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCC------TCTACAACACGCCGTGCC 43071
|||| | || |||| ||| ||| || | |||||||| | | ||
Sbjct 196353 CCGATCGCCTACTGT------TGGCACTCGGCAACAAGAAGTTCTACAACGCCACCAACC 196300
Query 43072 CCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCG 43131
|||||||||| ||||||||||| ||| ||| |||||||||||||| ||||||||||| |
Sbjct 196299 CCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTG 196240
Query 43132 TCGCCGACTACCAG 43145
| | ||| ||||||
Sbjct 196239 TTGGCGAGTACCAG 196226
>seq379
Length=54504
Score = 201 bits (222), Expect = 2e-46
Identities = 480/719 (67%), Gaps = 15/719 (2%)
Strand=Plus/Minus
Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747
||||| |||||||| || ||||| |||| | ||||| | ||||| ||||| |
Sbjct 5314 GCCAGATTGCAGACAGCGACCTCATCCGGAGCAGAGTACTCCATGATCTCAGTGCACAAA 5255
Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTG 244807
||| || |||||||||||| || | || || ||| |||| |||| ||||||||||
Sbjct 5254 TTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCCTTG 5195
Query 244808 TAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCC 244867
|| || ||||| || ||||||||| ||| || |||| | | ||| | | |
Sbjct 5194 TACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTTTC 5135
Query 244868 CTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCG 244927
||| |||||| || ||||||| ||| ||| || || |||||| ||| |
Sbjct 5134 TGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTG 5075
Query 244928 AACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAGACTCC 244985
|||||| || |||| || || || ||||| || | |||||||| ||| |||
Sbjct 5074 AACTCGTCACCGTAGACATCCGACAGACCAGGGCATTCGTTG--GGGCACATTAGAGTCC 5017
Query 244986 ACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGA 245045
| |||| | | ||| | |||||| ||||| ||||| |||||||| || | ||| |
Sbjct 5016 AAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACA 4957
Query 245046 GGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGA 245105
|| | | | || ||| ||| |||||| | || |||| || | | ||
Sbjct 4956 AATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGA 4897
Query 245106 CGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCT 245165
|||| ||||||| ||||| | ||||| || | || || || ||||||||||| ||||
Sbjct 4896 CGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCT 4837
Query 245166 GGTCCAC-CATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAG 245224
|||| || | | | | | |||| ||| || || | || || | ||||| ||
Sbjct 4836 GGTCAACGTAACGTGCAGTG-TTGTTGTAGACTCGTAGCATTGGTACAAGACCGTTGGAT 4778
Query 245225 TGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATG--- 245281
|||||| ||||| ||||| | ||| | |||||| |||| || |||||
Sbjct 4777 GTGCCGTTTGTGCCGCCAATGTATGAGCCTGTAGCCCTGATGTTG----TGAACATGAAG 4722
Query 245282 -CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCC 245340
|| | ||||| |||| ||||||||| | ||| || |||||| |||||| || ||
Sbjct 4721 ACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTGTCGTAGATACC 4662
Query 245341 CTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCT-TGGGG 245398
|| |||||||| ||||||| | || |||||||| | ||||| | || |||||
Sbjct 4661 ATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGGG 4603
>seq3382
Length=98737
Score = 87.8 bits (96), Expect = 3e-12
Identities = 100/131 (76%), Gaps = 4/131 (3%)
Strand=Plus/Minus
Query 242937 GAGCTGATGAGGTTCCCGGACAGGACCACTCCGATCGGACAGATGATCAACTCGTACCTG 242996
|||| ||||| |||||||||||||| || ||||||||||||||||||| || ||
Sbjct 57652 GAGCATATGAGATTCCCGGACAGGACGACAGTGATCGGACAGATGATCAACAGCTATCT- 57594
Query 242997 CTCAACAAG-AGCG-ATCTGGACGATCACGTCGTACACCTCCTGTTCTCGGCCAACCGAT 243054
||| || | || | | || ||||||| | |||| || || |||||||| || ||||
Sbjct 57593 -CCAAGGAGCATCGCAACAAGAAGATCACGCCATACATCTGCTTTTCTCGGCGAATCGAT 57535
Query 243055 GGGAAGCCGCC 243065
||||||| |||
Sbjct 57534 GGGAAGCTGCC 57524
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944248413590160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |