Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_009760.1
Length=218948
Score E
Sequences producing significant alignments: (Bits) Value
seq2678 127 3e-24
seq4975 84.2 3e-11
>seq2678
Length=718
Score = 127 bits (140), Expect = 3e-24
Identities = 183/258 (71%), Gaps = 0/258 (0%)
Strand=Plus/Plus
Query 164093 TTTCAACTCTTTACCAGCTTTGAATGCCGGTACTTTTGTTGCAGCAATTTCAATTTCTTC 164152
||| | | ||||||| | ||||||||| || | ||| | |||| |||||| ||||||||
Sbjct 153 TTTGAGCGCTTTACCTGGTTTGAATGCAGGGATTTTGCTCGCAGGAATTTCGATTTCTTC 212
Query 164153 ACCAGTTTGTGGGTTACGTCCCTTACGAGCCGCACGGTCACGAGTTTCGAATGTACCAAA 164212
||| ||||| ||||| ||||| ||||| || | || || ||| |||||| | |||||
Sbjct 213 ACCTGTTTGCGGGTTGCGTCCTTTACGTGCAGAGCGCTCGCGAACTTCGAAGTTCCCAAA 272
Query 164213 GCCGATTAACTGTACTTTGTTACCTTCTGCTAAAGCGTTTGTGATACCGCCAAATACTGC 164272
|| | || |||||||||| || | | ||| | | ||| | | ||||| ||
Sbjct 273 ACCAACCAATTGTACTTTGTCTCCGCTTTGAAGAGCCTCAGAGATTGCTTCGAATACGGC 332
Query 164273 GTCTACAGCTTTTGTAGCATCCTTTTTAGAGATTTCTGCTGTTTCAGCTACGTGGTTGAT 164332
|| || ||||| || |||||||||| || | ||| | | ||| | ||||| | ||
Sbjct 333 ATCAACCGCTTTCGTTACATCCTTTTTGGACAATTCAGTCGCTTCGGACACGTGTGTAAT 392
Query 164333 TAATTCAGTTTTGTTCAT 164350
|| || | |||||||||
Sbjct 393 CAAGTCTGATTTGTTCAT 410
>seq4975
Length=3947
Score = 84.2 bits (92), Expect = 3e-11
Identities = 112/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 164077 ATTATTTTACTGCTGTTTTCAACTCTTTACCAGCTTTGAATGCCGGTACTTTTGTTGCAG 164136
|||||||||| ||| ||| | | || || |||||||| || || || | | |||
Sbjct 266 ATTATTTTACGGCTTCTTTAAGTTTGTTGCCTGCTTTGAACGCAGGAACGGTGGACTCAG 207
Query 164137 CAATTTCAATTTCTTCACCAGTTTGTGGGTTACGTCCCTTACGAGCCGCACGGTCACGAG 164196
||| | ||||| | || ||||| ||||||||||| ||||| | | ||| | || |
Sbjct 206 GAATCACGATTTCATTCCCTGTTTGCGGGTTACGTCCGGTACGACCGGAACGTTTGCGGG 147
Query 164197 TTTCGAATGTACCAAAGCCGATTAACTGTACTTTGT 164232
| || || || ||||||||||| | ||||||||||
Sbjct 146 TCTCAAAAGTGCCAAAGCCGATCAGTTGTACTTTGT 111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 700438255142880
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |