Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq6817 134 1e-26
seq260 122 8e-23
seq2864 95.1 1e-14
>seq6817
Length=715036
Score = 134 bits (148), Expect = 1e-26
Identities = 358/535 (67%), Gaps = 33/535 (6%)
Strand=Plus/Minus
Query 47059 TCGAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATT---GAAA 47115
|||| | ||| || ||| | ||||| ||||| || ||||| || | ||| || |
Sbjct 196746 TCGACAACATCCCATGCATCCGCAGGAAGGCTGACTGGGCGTTGCGATGGATTTCTGACA 196687
Query 47116 ACGAAAACGTCACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCT 47175
| ||| || || || ||| ||| | ||||| || ||| ||| |||||| ||||||
Sbjct 196686 A-GAACTCGACATTC--GCCCTCCGTCTCATCGCATTTGCCGCCGTTGAGGGCATCTTCT 196630
Query 47176 TCTCGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCA 47235
|||| || ||||| || || || | |||| | || | ||| |||| ||||
Sbjct 196629 TCTCTGGATCTTTTGCTGCTATCTTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCA 196570
Query 47236 CGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCT-C 47294
| || |||||||| ||||| | || || ||| ||||||| |||| ||||| || |
Sbjct 196569 CATTCTCGAACGAGCTCATCTCCCGTGATGAGGGCATGCACACAGACTTCGCCTGCCTTC 196510
Query 47295 TACTACAACACTAGAGTC-GATCAA-AAGTTGGACGTGCCCACCGT-CAGCGACATGTTT 47351
| | || | || || || ||| | || | || || ||| | ||| ||
Sbjct 196509 TGTT------CTCGCATCTGAAGAACAAGCCGAACCAGGCCCTTGTGCAGAG-CATCATT 196457
Query 47352 GCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCG--AATCTTTAG 47409
|||| |||||| | |||||| |||||| || | || ||||| || || |||
Sbjct 196456 ACCGAGGCCGTCACGATTGAGCAGGAGTTCTTGACAGACGCTCTTCCATGCAAGCTTC-- 196399
Query 47410 TGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCG 47469
|||| |||||||| | | ||| | | ||||| ||||| |||||||| ||||| ||
Sbjct 196398 TGGGGATGAACGCTGGCCTCATGTCACAATACATTGAATTCGTCGCCGATCGCCTACTGT 196339
Query 47470 T-----TCAGCTA-AAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGA 47523
| || || | ||| ||| | ||| || || || || ||||| || |||
Sbjct 196338 TGGCACTCGGCAACAAG------AAGTTCTACAACGCCACCAACCCCTTCGACTTCATGG 196285
Query 47524 ACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578
| ||||||||||| | |||||||||||||| ||||||||||| || ||||| ||
Sbjct 196284 AGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTA 196230
>seq260
Length=339642
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | |||||| || | || || ||||| || || ||||| ||| |
Sbjct 135614 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAC 135673
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || ||| ||| || ||||| || || || | |||| |||||||| || || ||
Sbjct 135674 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 135733
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| |||||||||||| ||| ||| ||||| | |||| |||||| | ||||||
Sbjct 135734 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACC 135793
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| ||| | || |||||||| ||||| || || || ||||||||
Sbjct 135794 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 135840
Score = 95.1 bits (104), Expect = 1e-14
Identities = 152/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| |||||| || | || ||||| || || || |||||||| | || ||
Sbjct 135398 CGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGTGTCCGGCCG 135457
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || || ||| |||| | |||||||| || || || ||||||||||||
Sbjct 135458 TCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTG 135517
Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077
|| ||| || ||||| |||| |||| ||||| | || ||||||| || |
Sbjct 135518 TCTTGGATCTTTGACTTGACGTTG-TCGATCGTGTCGGATGATTCCACTTCGAGTGTGAT 135576
Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| |||||||| || || || || ||||| |||||
Sbjct 135577 AGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 135612
>seq2864
Length=266724
Score = 95.1 bits (104), Expect = 1e-14
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 126950 GTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATG 127009
|||||| ||| || | ||| ||||||||| ||||||| |||||||| || || || ||
Sbjct 247992 GTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCCGGTGGGATT 248051
Query 127010 CCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCG 127069
|||||||||||| ||| || ||||| | |||| |||||| | |||||| |||
Sbjct 248052 CCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCGACCTCG 248111
Query 127070 ACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104
| || | || ||||| || || || ||||| ||
Sbjct 248112 AGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGAA 248146
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475455086541840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |