Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq260 100 3e-16 seq2864 87.8 2e-12 >seq260 Length=339642 Score = 100 bits (110), Expect = 3e-16 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 ||||| ||||| | || ||| | ||||| || || ||||| ||||| || ||||| | Sbjct 135386 CCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCC--G 135443 Query 45174 ACGGTTTTAGAA--TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231 | || | | || || | || || || ||| | || | || ||||||||||| | Sbjct 135444 AAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTG 135503 Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCG 45290 | ||||| || || ||||| || ||| |||| || | || | |||||||| || || Sbjct 135504 GGATGCCCTCCTTGTCTTGGATCTTTGACTTGA-CGTTGTCGATCGTGTCGGATGATTCC 135562 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| || | || |||||||| || || || || ||||||||||| Sbjct 135563 ACTTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 135612 Score = 86.0 bits (94), Expect = 6e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || ||||| || || ||||| ||||| || || ||| | ||| | || || Sbjct 135860 ACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCCTCG 135919 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | || || |||||| | ||||| ||||||||||| || ||||||||||| ||||| || Sbjct 135920 AGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGAATGCCTTCCTTATCCTGG 135979 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 || || || | || | ||||||||| ||||| || ||||| |||| || ||| Sbjct 135980 ATCTTGCTCTTCACATTATCGATGGTGTCGGACGACTCAACCTCGAGGGTAATGGTCTTG 136039 Query 45312 CCGGT 45316 ||||| Sbjct 136040 CCGGT 136044 >seq2864 Length=266724 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 45151 CCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATA 45210 |||| ||||| ||||| ||| || ||| | ||| ||||| || ||||| ||| | | Sbjct 247966 CCTTCTGGATGTTATAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGA 248025 Query 45211 TCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTT 45270 |||| || ||||||||||| || || || || || || || || || |||| | Sbjct 248026 TCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 248085 Query 45271 CTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAA 45330 | | ||||||| |||||||| ||||| || | || ||||| || || || ||||| | Sbjct 248086 CGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGA 248145 Query 45331 A 45331 | Sbjct 248146 A 248146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451959745542360