Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_013085.1
Length=194454
Score E
Sequences producing significant alignments: (Bits) Value
seq2141 95.1 2e-14
seq4291 84.2 3e-11
>seq2141
Length=3127
Score = 95.1 bits (104), Expect = 2e-14
Identities = 116/155 (75%), Gaps = 9/155 (6%)
Strand=Plus/Plus
Query 31937 GGACTTGAACCTCCACGTCGCAAGGACACTGGAACCTAAACCCAGCGCGTCTACCAATTC 31996
||||||||||| ||||||| || ||| || || ||||| | || |||||| |||||||
Sbjct 1362 GGACTTGAACCCCCACGTC--AAAGACGCTAGATCCTAAGTCTAGTGCGTCTGCCAATTC 1419
Query 31997 CGCCATAC-CG-----ACTGGCGACTCAAGTAGGATTCGAACCTACGACCGACTGCTTAG 32050
||||| || || ||| || ||| | ||| |||||||| |||| ||| |||
Sbjct 1420 CGCCACACGCGCATATGATGGTGAGTCATGAAGGGCTCGAACCTTCGACACCCTGATTAA 1479
Query 32051 AAGGCAGTTGCTCTATCCAGCTGAGCTATTGAGTC 32085
||| ||| ||||||| ||| |||||||| ||| ||
Sbjct 1480 AAGTCAGGTGCTCTA-CCAACTGAGCTAATGACTC 1513
>seq4291
Length=1415
Score = 84.2 bits (92), Expect = 3e-11
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 32023 GGATTCGAACCTACGACCGACTGCTTAGAAGGCAGTTGCTCTATCCAGCTGAGCTATTGA 32082
||||||||||| |||||||| ||||||||| |||||||||||||||||||||| |||
Sbjct 522 GGATTCGAACCCCCGACCGACGCCTTAGAAGGGCGTTGCTCTATCCAGCTGAGCTACTGA 581
Query 32083 GTCATG 32088
| ||||
Sbjct 582 GACATG 587
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622064990477040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |