Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq2141 95.1 2e-14 seq4291 84.2 3e-11 >seq2141 Length=3127 Score = 95.1 bits (104), Expect = 2e-14 Identities = 116/155 (75%), Gaps = 9/155 (6%) Strand=Plus/Plus Query 31937 GGACTTGAACCTCCACGTCGCAAGGACACTGGAACCTAAACCCAGCGCGTCTACCAATTC 31996 ||||||||||| ||||||| || ||| || || ||||| | || |||||| ||||||| Sbjct 1362 GGACTTGAACCCCCACGTC--AAAGACGCTAGATCCTAAGTCTAGTGCGTCTGCCAATTC 1419 Query 31997 CGCCATAC-CG-----ACTGGCGACTCAAGTAGGATTCGAACCTACGACCGACTGCTTAG 32050 ||||| || || ||| || ||| | ||| |||||||| |||| ||| ||| Sbjct 1420 CGCCACACGCGCATATGATGGTGAGTCATGAAGGGCTCGAACCTTCGACACCCTGATTAA 1479 Query 32051 AAGGCAGTTGCTCTATCCAGCTGAGCTATTGAGTC 32085 ||| ||| ||||||| ||| |||||||| ||| || Sbjct 1480 AAGTCAGGTGCTCTA-CCAACTGAGCTAATGACTC 1513 >seq4291 Length=1415 Score = 84.2 bits (92), Expect = 3e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 32023 GGATTCGAACCTACGACCGACTGCTTAGAAGGCAGTTGCTCTATCCAGCTGAGCTATTGA 32082 ||||||||||| |||||||| ||||||||| |||||||||||||||||||||| ||| Sbjct 522 GGATTCGAACCCCCGACCGACGCCTTAGAAGGGCGTTGCTCTATCCAGCTGAGCTACTGA 581 Query 32083 GTCATG 32088 | |||| Sbjct 582 GACATG 587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622064990477040