Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq6817 93.3 5e-14 >seq6817 Length=715036 Score = 93.3 bits (102), Expect = 5e-14 Identities = 353/542 (65%), Gaps = 24/542 (4%) Strand=Plus/Plus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 || ||||| || ||||||||||| || ||| || || | |||||| || | |||| Sbjct 196536 CCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCATGAGACCACGTTTC 196595 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 || ||||| ||||| ||| |||| |||||| |||||||||||||| || ||| || Sbjct 196596 TTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATGCCCTCAACGGCGGCAAAT 196655 Query 119634 GCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC-GAA--CCACTTGAGAGCCCAGTT 119689 |||| ||||| || || |||||| |||||| ||| ||| | ||||||| Sbjct 196656 GCGATGAGACGGAGGGC-GAATGTCGAGTTCTTGTCAGAAATCCATCGCAACGCCCAGTC 196714 Query 119690 GGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAG------TTGCTTCTT 119743 ||||| | ||||| |||| | | |||||| | ||| || | ||| ||| Sbjct 196715 AGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAACAGGTATGTTCGCTGCTT 196774 Query 119744 TTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCACCATGAACCAT 119803 | || || | || ||| |||| ||||| || || ||||| || | | Sbjct 196775 T--GGC----TCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGGAGTGGATGTT 196828 Query 119804 -TTCATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGCACTTCGTCAG 119862 | ||| || ||| || | || || | || || || | || ||||| || || Sbjct 196829 CTCCATCATG-ATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGCACCTC-AGAG 196886 Query 119863 CAAAATTG-TTGTTGATATTTTCAAAAACAATTCCATCGGATCCAGCGAAGAATGCTAAG 119921 | || | | | || || || ||||| ||||||||| | ||||||||||| | | Sbjct 196887 CTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAGAATGCGAGG 196946 Query 119922 ATGTACTTTATGAATTTCTGTTCATTATCGTTGAGT---GTTTTCCAGTCGTCCATATCT 119978 | || ||||| |||| | ||||||||| | |||||||||| | ||| Sbjct 196947 ACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTCGTGGAGATCC 197006 Query 119979 TTAGACAAGTCCACCTCTTCAGCTGTCCAGTTAGACATCTGTGCCTTTTTATAGAGTTCC 120038 || |||| || | ||| |||||||||||| || || |||||||| || | || | Sbjct 197007 TTCGACAGATCAATCTCCTCAGCTGTCCAGAATGAGGCCTCGGCCTTTTTGTACATTTGC 197066 Query 120039 CA 120040 || Sbjct 197067 CA 197068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588919377319800