Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_015274.1
Length=56506
Score E
Sequences producing significant alignments: (Bits) Value
seq6544 104 8e-18
>seq6544
Length=1109
Score = 104 bits (114), Expect = 8e-18
Identities = 219/327 (67%), Gaps = 0/327 (0%)
Strand=Plus/Plus
Query 211 TGACTATAATCCAGACGTCCTTGAAACTTTCCCTAACAAACATCCTGAAAATAATTACCT 270
||| ||| |||||| | | | || | |||| |||||| || || | | |||| |
Sbjct 229 TGAATATGATCCAGGCATTTTAGAGAATTTCGATAACAAGCACCCGTACCGTGATTATTT 288
Query 271 AGTAACATTTGACGGATATGAATTCACTTCCCTTTGCCCTAAAACAGGACAGCCTGACTT 330
|| | ||| || | || ||||| || ||||| | || || ||||| |||||
Sbjct 289 TGTCAAATTCAACTGCCCCGAGTTCACCAGTCTGTGCCCGATTACGGGTCAGCCAGACTT 348
Query 331 CGCGAATGTTTTCATTAGTTACATTCCAAACGAAAAGATGGTTGAATCTAAATCATTGAA 390
|| | ||| ||||| ||||| || | | ||| ||||| || || || | ||
Sbjct 349 TGCAACCATTTATATTAGCTACATCCCTGATGTAAAAATGGTAGAGAGCAAGTCTCTTAA 408
Query 391 ATTGTACTTATTCAGTTTCCGTAACCACGGTGACTTCCACGAAGATTGCATGAACATTAT 450
||||| | ||||| ||||| ||||| || || |||||||| ||||| ||||||| ||
Sbjct 409 GCTGTACCTGTTCAGCTTCCGCAACCATGGAGATTTCCACGAGGATTGTGTGAACATCAT 468
Query 451 TTTGAATGACTTGTATGAATTGATGGAACCTAAGTACATTGAAGTCATGGGCCTATTCAC 510
|||| ||| || | | ||||||| || ||||||||||| |||| ||| ||
Sbjct 469 CATGAACGACCTGATTAAGCTGATGGACCCGCGCTACATTGAAGTGTGGGGCAAATTTAC 528
Query 511 TCCTCGTGGTGGAATTTCAATTTACCC 537
|| || || || || || || ||||
Sbjct 529 GCCGCGCGGAGGCATCTCCATCGACCC 555
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 180681096775256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |