Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_015274.1 Length=56506 Score E Sequences producing significant alignments: (Bits) Value seq6544 104 8e-18 >seq6544 Length=1109 Score = 104 bits (114), Expect = 8e-18 Identities = 219/327 (67%), Gaps = 0/327 (0%) Strand=Plus/Plus Query 211 TGACTATAATCCAGACGTCCTTGAAACTTTCCCTAACAAACATCCTGAAAATAATTACCT 270 ||| ||| |||||| | | | || | |||| |||||| || || | | |||| | Sbjct 229 TGAATATGATCCAGGCATTTTAGAGAATTTCGATAACAAGCACCCGTACCGTGATTATTT 288 Query 271 AGTAACATTTGACGGATATGAATTCACTTCCCTTTGCCCTAAAACAGGACAGCCTGACTT 330 || | ||| || | || ||||| || ||||| | || || ||||| ||||| Sbjct 289 TGTCAAATTCAACTGCCCCGAGTTCACCAGTCTGTGCCCGATTACGGGTCAGCCAGACTT 348 Query 331 CGCGAATGTTTTCATTAGTTACATTCCAAACGAAAAGATGGTTGAATCTAAATCATTGAA 390 || | ||| ||||| ||||| || | | ||| ||||| || || || | || Sbjct 349 TGCAACCATTTATATTAGCTACATCCCTGATGTAAAAATGGTAGAGAGCAAGTCTCTTAA 408 Query 391 ATTGTACTTATTCAGTTTCCGTAACCACGGTGACTTCCACGAAGATTGCATGAACATTAT 450 ||||| | ||||| ||||| ||||| || || |||||||| ||||| ||||||| || Sbjct 409 GCTGTACCTGTTCAGCTTCCGCAACCATGGAGATTTCCACGAGGATTGTGTGAACATCAT 468 Query 451 TTTGAATGACTTGTATGAATTGATGGAACCTAAGTACATTGAAGTCATGGGCCTATTCAC 510 |||| ||| || | | ||||||| || ||||||||||| |||| ||| || Sbjct 469 CATGAACGACCTGATTAAGCTGATGGACCCGCGCTACATTGAAGTGTGGGGCAAATTTAC 528 Query 511 TCCTCGTGGTGGAATTTCAATTTACCC 537 || || || || || || || |||| Sbjct 529 GCCGCGCGGAGGCATCTCCATCGACCC 555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180681096775256