Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq5592 100 3e-16 >seq5592 Length=112189 Score = 100 bits (110), Expect = 3e-16 Identities = 166/237 (70%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 159547 ATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGT 159606 || ||| | ||||||||||| || ||||| ||||| || | ||| || | || Sbjct 20534 ATCATGGTAACATATCCATCGACGTTCGGTGTGTTTGAGCCAGAAGTCAAGAAGGTCTGC 20475 Query 159607 AAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAG 159666 | |||| || | |||| || ||||| || | ||||| |||||| | || || ||| Sbjct 20474 GATCTTGTCCACCATTATGGCGGGCAGGTCTACATGGATGGCGCAAATATGAACGCTCAG 20415 Query 159667 GTAGGTCTAGCAAAACCATGTGACTAT-GGTGCAGATGTATGTCATCTAAACTTACATAA 159725 | || || | ||| | || || || || ||||| || ||||| ||| | ||||| Sbjct 20414 ATCGGCCTCACTTCTCCAGGA-ACAATTGGCGCGGATGTGTGCCATCTGAACCTGCATAA 20356 Query 159726 GACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGC 159782 ||| |||||||||||||| || || || || ||||| || || ||||| ||||| || Sbjct 20355 GACCTTCTGTATTCCACACGGTGGAGGCGGACCTGGTGTCGGACCTATCGGTGTTGC 20299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587994666227760