Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq260 143 6e-29
seq3236 86.0 1e-11
>seq260
Length=339642
Score = 143 bits (158), Expect = 6e-29
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| ||||||||||| || || || |||||||| | ||| || | || || || |||||
Sbjct 135409 GTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGTGTCCGGCCGTCCTCAAGCTG 135468
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| || || || ||||| || || ||||| || |||||||| || ||
Sbjct 135469 CTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGGATCTT 135528
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
| ||||||||| || || ||||| || ||||||||| || || | ||||| || ||
Sbjct 135529 TGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGTGATAGTCTTGCCGGT 135588
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| || || ||||| | ||||||
Sbjct 135589 GAGTGTCTTGACGAAAATTTGCAT 135612
Score = 114 bits (126), Expect = 3e-20
Identities = 150/206 (73%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| ||||| || ||||| || || ||||| |||| ||||| | ||||| ||||||||
Sbjct 135637 GTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTCGAGCTG 135696
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| ||||| || || || || || ||||| || || || || || ||||| || || ||
Sbjct 135697 CTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTT 135756
Query 195057 TTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114
|||||| || || ||||||| | | || || || || ||||| | ||||| ||
Sbjct 135757 CGACTTGACATTGTCGATGGTGTCGCTGGAC--TCGACCTCGAGGGTGATGGTCTTGCCG 135814
Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140
|| | ||| || ||||| | |||||
Sbjct 135815 GTGAGAGTCTTGACGAAGATCTGCAT 135840
Score = 109 bits (120), Expect = 1e-18
Identities = 135/185 (73%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || |||||| ||| || || || ||||| |||| || || | || || |||
Sbjct 135860 ACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCCTCG 135919
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| |||||||| || | ||||| ||||| || ||||||||||| || || ||
Sbjct 135920 AGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGAATGCCTTCCTTATCCTGG 135979
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| || || || |||||||| || || || || ||||||| |||||
Sbjct 135980 ATCTTGCTCTTCACATTATCGATGGTGTCGGACGACTCAACCTCGAGGGTAATGGTCTTG 136039
Query 195112 CCTGT 195116
|| ||
Sbjct 136040 CCGGT 136044
>seq3236
Length=283868
Score = 86.0 bits (94), Expect = 1e-11
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || ||| ||| || ||||| ||||| |||| || || | ||||| |||
Sbjct 201559 ACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCG 201500
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048
|||||||| || |||||||| | || || ||||| || ||||| || || ||||||
Sbjct 201499 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGAATTCCCTCCTTGTCT 201443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109372270642997
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |