Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq7284 93.3 6e-14 >seq7284 Length=231214 Score = 93.3 bits (102), Expect = 6e-14 Identities = 162/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 197419 TTGTTGACCTGAGACACTCCGTTCATGTACAACACGTCAAAAGCAAAGACGCACACCTGG 197478 || || ||| | | | | ||||| | ||| | | ||| || ||||| || ||||| | | Sbjct 216864 TTATTTACCAGCGCCTCGCCGTTGAGGTAGAGGATGTCGAATGCAAACACACACACTTTG 216805 Query 197479 ACGGTTATCTCTTCTTCCTTGACATCTTTACGTTTTCTG-GTCGCCAGCTTTTGAAAGGG 197537 || | || ||||| |||||| || || | ||||| | ||| |||| ||| || || Sbjct 216804 ACTTTGATGTCTTCGGTCTTGACGTCCTT-CTTTTTCCGTGTCATGAGCTGTTGGAAAGG 216746 Query 197538 AAGGATCTGCTTCTTCTCAACGTCCCAAGCAACTGCCTCAGCGTCCAAGATGAAAGACTT 197597 |||| |||||||||||||| ||||| || || | |||| ||| | | ||| || Sbjct 216745 TAGGACATGCTTCTTCTCAACATCCCAGGCGACAGTCTCACAGTCGAGCACGAAGCTCTG 216686 Query 197598 CACTCCCTCGTTGATCGATTGGGGAAGCCTATTGATTATGTCGGGGTACTTCT 197650 | ||||| |||| | | | || || || | || |||||||||||||||| Sbjct 216685 GATTCCCTGCTTGACCCACTTTGGTAGTCTCTCGAGGATGTCGGGGTACTTCT 216633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676664540908080