Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq379 248 2e-60 seq6817 230 4e-55 >seq379 Length=54504 Score = 248 bits (274), Expect = 2e-60 Identities = 959/1491 (64%), Gaps = 43/1491 (3%) Strand=Plus/Minus Query 212711 CTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTC 212770 |||||| || || | | | |||||| ||||| | | ||| | | |||| || ||| Sbjct 6089 CTGGTCGATAAAAGCACCACGGTCAGCAGCCATCTGCACGATGTTACGCTGGCTGATCTC 6030 Query 212771 CCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGA 212830 ||| ||||||||| ||| | | |||||||| ||||| | | ||||||| ||| | || Sbjct 6029 CCAGACGGTCTTGTAGAGTGCCTTGAGGTCGTCTGGAATGTTGGGGATGCGCTGAATGGA 5970 Query 212831 CCCCCTGTGTATGGTCAGC--TGCAGGCG------CATGTCCTCGTTCCAGAGGCCCCTG 212882 || || |||||| || | ||| ||||| ||| ||| ||||| | | Sbjct 5969 GCC-------ATTGTCAGCGATG-ATGCGGTTCTTCATGTTCTCTGACCACAGGCCAC-G 5919 Query 212883 GTCTCC-AGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCT 212941 ||| | || ||| | || |||||||| | |||||| || || | | ||| | Sbjct 5918 GTCGACGAGATCCTTCAGAAGCCATGGGTTGACGACCTGGAACTCGCCAGCCAACACACG 5859 Query 212942 CCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGC 213001 | ||||| ||| ||||| ||||||| || |||||| |||| ||||| | Sbjct 5858 ACGAGAGTAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATCTGCGA 5799 Query 213002 AGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGAT 213061 || |||||| ||||| || || || || || ||| | ||| ||||||| | |||| Sbjct 5798 GGTCGAGGCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGAT 5739 Query 213062 GAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCA 213121 || | || | ||||||||||| | | | ||| ||| | | | || Sbjct 5738 CTTGCCCTTGAGTGCGGCCCAGTCCCAGAGGTCGGT-AGGA----GTCTTGCCC----CA 5688 Query 213122 CATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCC 213181 |||||| |||| | ||| | || || ||| |||| | ||| || || Sbjct 5687 CATGTCGTACTGGAGCTCGCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAGGACC 5628 Query 213182 ATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATAT 213241 ||| || || |||||||| || |||| || ||||| | |||||||| ||||| || Sbjct 5627 GAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCAAAAAT 5568 Query 213242 CTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACAC 213301 || ||||||||| ||||||||| || || ||| ||||| | ||| | Sbjct 5567 CTGGATGTTGAGCTCCTTGGCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAAGAAGGC 5508 Query 213302 ATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGC 213360 |||||| || || | ||| || | || ||||||| ||| | | ||| ||| | || Sbjct 5507 ATCAGCAAGACCGTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTTGCTCTTTCGTGC 5448 Query 213361 ACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTT 213420 ||| | ||||| ||||| |||||| ||||||| ||||| || ||| |||||| Sbjct 5447 -CTCTGGTACCGGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGACCACTT 5389 Query 213421 TGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAG 213480 ||||||| | | || | || | | || || | | | || | || | | Sbjct 5388 TGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGTCGACGTAGGTGG 5329 Query 213481 GCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGA 213540 |||| || | ||||| ||||| || || ||||| | | | | ||||||||||| Sbjct 5328 GCAGAGCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCCGGAGCAGAGTACTCCATGA 5269 Query 213541 TCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGT 213600 |||| ||||||| || || ||||||||| || |||| ||||| ||| || Sbjct 5268 TCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGT 5209 Query 213601 TGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCT 213660 |||| | |||||||| || ||| | || | |||||||| ||| | | | || || Sbjct 5208 TGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAG 5149 Query 213661 GGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTAC 213719 ||| | | | || || | ||| || || || | | | | | ||| || Sbjct 5148 CATACCATATTTTCTGAGC----ACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCATAA 5093 Query 213720 TGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCG 213779 | ||||| ||||| ||||| |||| || |||| ||| || || || | Sbjct 5092 CGCTCGTACAGCTCCTTGAACTCGTCACCGTAGACATCCGACAGACCAGGGCATTCGTTG 5033 Query 213780 GGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACC 213839 || ||||| || |||| |||| | | ||| | |||||| || || || || | | Sbjct 5032 GGGCACATTAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATC 4973 Query 213840 CACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGA 213899 || || ||| ||||| || | | | || ||| |||| ||| ||||| || Sbjct 4972 CAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGG 4913 Query 213900 TCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGC 213959 || | || | | || ||| |||||||||||||| | |||||||||||| || || || Sbjct 4912 TCCATGAACTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGA 4853 Query 213960 CTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGT 214016 | |||| || |||||||| || | || ||||| ||| || || | ||| Sbjct 4852 CGCTTGTTGCCACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCATTGGT 4793 Query 214017 ACCAGCCCGTTGGACTGT-CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTT 214075 || || |||||||| ||| ||||| || || | || || ||||| | ||||| | ||| Sbjct 4792 ACAAGACCGTTGGA-TGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTAGCCCTGATGTT 4734 Query 214076 GCT--CATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACA 214133 | |||| ||| || || || || |||| ||||||||||||||| || | | | Sbjct 4733 GTGAACATGAAGA--CCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGG 4676 Query 214134 GTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAG 214184 || || ||| || | ||||||||||| | | | || |||||||||| Sbjct 4675 GTGTCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAG 4625 >seq6817 Length=715036 Score = 230 bits (254), Expect = 4e-55 Identities = 567/854 (66%), Gaps = 16/854 (2%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || | ||||| |||||||| ||||| || ||| ||| |||||||| Sbjct 196226 CTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTCTC 196285 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956 ||||||| ||||||||||| | ||| || | | | ||| ||| | || ||| | Sbjct 196286 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTT--GCCGA---GTGCCAAC 196340 Query 47957 AG---GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013 || | |||| |||||| | || ||||||| |||||||||| |||||| || | Sbjct 196341 AGTAGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGA 196400 Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073 || || | ||| | ||| | ||||||| ||| ||| ||||| || | Sbjct 196401 AGCTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCAATCGTGACGGCCTCGGTAATG 196460 Query 48074 ATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 || || || ||| || || ||||| ||| ||| | | || | |||| Sbjct 196461 ATGCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGA---ACAGAAGGCAG 196517 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 || ||||| |||||| ||| || || ||| ||||||| |||| ||||| ||| || Sbjct 196518 GCGAAGTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCG 196577 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 | ||||| || | | || |||||||| || || || ||||| ||||||||||||||| Sbjct 196578 GCCATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATG 196637 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 ||||| || || || || ||| |||| | |||| | | ||||||||| || ||| Sbjct 196638 CCCTCAACGGCGGCAAATGCGATGAGACGGAGGGCGAATGTCGAGTTCTTGTCAGAAATC 196697 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373 || | ||||||||| |||||| | ||||||||| || | || ||||| ||| Sbjct 196698 CATCGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAAC 196757 Query 48374 AGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433 || | | | || || || | || ||| || || | || |||| Sbjct 196758 AGGTATGTTCGCTGCTTTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCG 196817 Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493 ||||| | ||||| || ||||||||| ||||||||| | ||||| | |||| Sbjct 196818 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGC 196877 Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553 || || | | ||| | ||| | || ||||| ||||| || ||||| || || || ||| Sbjct 196878 ACCTCAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAG 196937 Query 48554 AAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAG-AGC--ATTCCAGCCC 48610 || || ||||| ||| | ||| || |||| || | |||| || |||||| | Sbjct 196938 AATGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTCG 196997 Query 48611 TGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTG 48670 || | || || ||| || | || || | |||||||| || || || |||||| Sbjct 196998 TGGAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCAGAATGAGGCCTCGGCCTTTTTG 197057 Query 48671 TACATGCCCCATAT 48684 ||||| |||||| Sbjct 197058 TACATTTGCCATAT 197071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931443244765440