Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq379 248 2e-60
seq6817 230 4e-55
>seq379
Length=54504
Score = 248 bits (274), Expect = 2e-60
Identities = 959/1491 (64%), Gaps = 43/1491 (3%)
Strand=Plus/Minus
Query 212711 CTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTC 212770
|||||| || || | | | |||||| ||||| | | ||| | | |||| || |||
Sbjct 6089 CTGGTCGATAAAAGCACCACGGTCAGCAGCCATCTGCACGATGTTACGCTGGCTGATCTC 6030
Query 212771 CCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGA 212830
||| ||||||||| ||| | | |||||||| ||||| | | ||||||| ||| | ||
Sbjct 6029 CCAGACGGTCTTGTAGAGTGCCTTGAGGTCGTCTGGAATGTTGGGGATGCGCTGAATGGA 5970
Query 212831 CCCCCTGTGTATGGTCAGC--TGCAGGCG------CATGTCCTCGTTCCAGAGGCCCCTG 212882
|| || |||||| || | ||| ||||| ||| ||| ||||| | |
Sbjct 5969 GCC-------ATTGTCAGCGATG-ATGCGGTTCTTCATGTTCTCTGACCACAGGCCAC-G 5919
Query 212883 GTCTCC-AGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCT 212941
||| | || ||| | || |||||||| | |||||| || || | | ||| |
Sbjct 5918 GTCGACGAGATCCTTCAGAAGCCATGGGTTGACGACCTGGAACTCGCCAGCCAACACACG 5859
Query 212942 CCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGC 213001
| ||||| ||| ||||| ||||||| || |||||| |||| ||||| |
Sbjct 5858 ACGAGAGTAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATCTGCGA 5799
Query 213002 AGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGAT 213061
|| |||||| ||||| || || || || || ||| | ||| ||||||| | ||||
Sbjct 5798 GGTCGAGGCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGAT 5739
Query 213062 GAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCA 213121
|| | || | ||||||||||| | | | ||| ||| | | | ||
Sbjct 5738 CTTGCCCTTGAGTGCGGCCCAGTCCCAGAGGTCGGT-AGGA----GTCTTGCCC----CA 5688
Query 213122 CATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCC 213181
|||||| |||| | ||| | || || ||| |||| | ||| || ||
Sbjct 5687 CATGTCGTACTGGAGCTCGCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAGGACC 5628
Query 213182 ATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATAT 213241
||| || || |||||||| || |||| || ||||| | |||||||| ||||| ||
Sbjct 5627 GAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCAAAAAT 5568
Query 213242 CTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACAC 213301
|| ||||||||| ||||||||| || || ||| ||||| | ||| |
Sbjct 5567 CTGGATGTTGAGCTCCTTGGCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAAGAAGGC 5508
Query 213302 ATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGC 213360
|||||| || || | ||| || | || ||||||| ||| | | ||| ||| | ||
Sbjct 5507 ATCAGCAAGACCGTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTTGCTCTTTCGTGC 5448
Query 213361 ACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTT 213420
||| | ||||| ||||| |||||| ||||||| ||||| || ||| ||||||
Sbjct 5447 -CTCTGGTACCGGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGACCACTT 5389
Query 213421 TGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAG 213480
||||||| | | || | || | | || || | | | || | || | |
Sbjct 5388 TGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGTCGACGTAGGTGG 5329
Query 213481 GCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGA 213540
|||| || | ||||| ||||| || || ||||| | | | | |||||||||||
Sbjct 5328 GCAGAGCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCCGGAGCAGAGTACTCCATGA 5269
Query 213541 TCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGT 213600
|||| ||||||| || || ||||||||| || |||| ||||| ||| ||
Sbjct 5268 TCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGT 5209
Query 213601 TGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCT 213660
|||| | |||||||| || ||| | || | |||||||| ||| | | | || ||
Sbjct 5208 TGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAG 5149
Query 213661 GGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTAC 213719
||| | | | || || | ||| || || || | | | | | ||| ||
Sbjct 5148 CATACCATATTTTCTGAGC----ACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCATAA 5093
Query 213720 TGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCG 213779
| ||||| ||||| ||||| |||| || |||| ||| || || || |
Sbjct 5092 CGCTCGTACAGCTCCTTGAACTCGTCACCGTAGACATCCGACAGACCAGGGCATTCGTTG 5033
Query 213780 GGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACC 213839
|| ||||| || |||| |||| | | ||| | |||||| || || || || | |
Sbjct 5032 GGGCACATTAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATC 4973
Query 213840 CACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGA 213899
|| || ||| ||||| || | | | || ||| |||| ||| ||||| ||
Sbjct 4972 CAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGG 4913
Query 213900 TCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGC 213959
|| | || | | || ||| |||||||||||||| | |||||||||||| || || ||
Sbjct 4912 TCCATGAACTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGA 4853
Query 213960 CTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGT 214016
| |||| || |||||||| || | || ||||| ||| || || | |||
Sbjct 4852 CGCTTGTTGCCACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCATTGGT 4793
Query 214017 ACCAGCCCGTTGGACTGT-CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTT 214075
|| || |||||||| ||| ||||| || || | || || ||||| | ||||| | |||
Sbjct 4792 ACAAGACCGTTGGA-TGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTAGCCCTGATGTT 4734
Query 214076 GCT--CATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACA 214133
| |||| ||| || || || || |||| ||||||||||||||| || | | |
Sbjct 4733 GTGAACATGAAGA--CCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGG 4676
Query 214134 GTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAG 214184
|| || ||| || | ||||||||||| | | | || ||||||||||
Sbjct 4675 GTGTCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAG 4625
>seq6817
Length=715036
Score = 230 bits (254), Expect = 4e-55
Identities = 567/854 (66%), Gaps = 16/854 (2%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
|||||| || || || | ||||| |||||||| ||||| || ||| ||| ||||||||
Sbjct 196226 CTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTCTC 196285
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956
||||||| ||||||||||| | ||| || | | | ||| ||| | || ||| |
Sbjct 196286 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTT--GCCGA---GTGCCAAC 196340
Query 47957 AG---GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013
|| | |||| |||||| | || ||||||| |||||||||| |||||| || |
Sbjct 196341 AGTAGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGA 196400
Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073
|| || | ||| | ||| | ||||||| ||| ||| ||||| || |
Sbjct 196401 AGCTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCAATCGTGACGGCCTCGGTAATG 196460
Query 48074 ATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133
|| || || ||| || || ||||| ||| ||| | | || | ||||
Sbjct 196461 ATGCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGA---ACAGAAGGCAG 196517
Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193
|| ||||| |||||| ||| || || ||| ||||||| |||| ||||| ||| ||
Sbjct 196518 GCGAAGTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCG 196577
Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253
| ||||| || | | || |||||||| || || || ||||| |||||||||||||||
Sbjct 196578 GCCATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATG 196637
Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313
||||| || || || || ||| |||| | |||| | | ||||||||| || |||
Sbjct 196638 CCCTCAACGGCGGCAAATGCGATGAGACGGAGGGCGAATGTCGAGTTCTTGTCAGAAATC 196697
Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373
|| | ||||||||| |||||| | ||||||||| || | || ||||| |||
Sbjct 196698 CATCGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAAC 196757
Query 48374 AGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433
|| | | | || || || | || ||| || || | || ||||
Sbjct 196758 AGGTATGTTCGCTGCTTTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCG 196817
Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493
||||| | ||||| || ||||||||| ||||||||| | ||||| | ||||
Sbjct 196818 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGC 196877
Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553
|| || | | ||| | ||| | || ||||| ||||| || ||||| || || || |||
Sbjct 196878 ACCTCAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAG 196937
Query 48554 AAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAG-AGC--ATTCCAGCCC 48610
|| || ||||| ||| | ||| || |||| || | |||| || |||||| |
Sbjct 196938 AATGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTCG 196997
Query 48611 TGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTG 48670
|| | || || ||| || | || || | |||||||| || || || ||||||
Sbjct 196998 TGGAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCAGAATGAGGCCTCGGCCTTTTTG 197057
Query 48671 TACATGCCCCATAT 48684
||||| ||||||
Sbjct 197058 TACATTTGCCATAT 197071
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931443244765440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |