Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_019544.1
Length=49335
Score E
Sequences producing significant alignments: (Bits) Value
seq5656 98.7 3e-16
seq6680 80.6 8e-11
>seq5656
Length=255
Score = 98.7 bits (108), Expect = 3e-16
Identities = 173/252 (69%), Gaps = 0/252 (0%)
Strand=Plus/Minus
Query 45646 CTATTTGCAGGAGAATGGTGTGACGATTTGGGACGAGTGGGCCGATGAAAACGGCGATCT 45705
|||| || |||| ||||| |||| ||| ||||| || ||||| || ||||| || ||| |
Sbjct 254 CTATCTGAAGGAAAATGGCGTGAAGATCTGGGATGATTGGGCTGACGAAAATGGTGATTT 195
Query 45706 CGGCCCAATCTACGGCGCGCAATGGCGGTCGTGGAAAGGGGCTGACGGGAAAACGGTCGA 45765
|| || | ||||| | |||||||| | ||| ||| | | || | | | | ||
Sbjct 194 GGGTCCGGTATACGGATCTCAATGGCGCACTTGGGAAGCACCCAATGGAGAGAAGATTGA 135
Query 45766 CCAAATTGCGGCGGTCTTTAAGGAAATCAAGCGCAACCCGAACTCGCGGCGGTTGCTTGT 45825
|| ||||| || || || | ||| || ||| ||| | || || || || ||
Sbjct 134 TCAGATTGCAGCTGTAATTGATTCAATTAAAAACAATCCGGATTCACGACGTCACCTCGT 75
Query 45826 GAGCGCGTGGAACGTGGCAAAGTTGGGGGAAATGAAGTTGCCCCCATGTCATTACGCCTT 45885
||||| ||||| ||||| || | | ||||| ||||||| || |||| ||| ||
Sbjct 74 TAGCGCCTGGAATGTGGCGGAGATTAACAACATGAAACTGCCCCCTTGCCATTTCGCGTT 15
Query 45886 TCAGTTTTACGT 45897
||||||||||||
Sbjct 14 TCAGTTTTACGT 3
>seq6680
Length=1954
Score = 80.6 bits (88), Expect = 8e-11
Identities = 127/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 35811 CAACTGAACCGGGCAGTGGAGCAAAGGGCGGACAAACGCCCGACGATGGCAGACCTTCGA 35870
|| |||| ||||| || |||||| | ||| ||||| |||| |||| ||| | ||
Sbjct 1952 CAGCTGAGCCGGGGTGTAGAGCAACGTCAGGATAAACGTCCGATGATGAGTGACTTGCGG 1893
Query 35871 GAGTCGGGAAGCATCGAGCAAATTGCTGATTTGATTGCCTTCCTGTACCGCGAGGACTAT 35930
|| |||||| ||||||||| |||||| | | || ||||||||||| || |||||
Sbjct 1892 GAATCGGGATCGATCGAGCAAGATGCTGACATCGTAGCGTTCCTGTACCGGGATGACTAC 1833
Query 35931 TACAATCGGGACGCTGAACAAACAGGAATCACAGAAATTATTGTTGCCAAAAACCGTAAC 35990
|| || | ||| | || | | | || | || |||||| | |||||| | |||||
Sbjct 1832 TATAACCAGGAGACCGAGAAGAAAAACATTATCGAGATTATTATCGCCAAACAGCGTAAT 1773
Query 35991 GG 35992
||
Sbjct 1772 GG 1771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 157735992557374
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |