Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq5656 98.7 3e-16 seq6680 80.6 8e-11 >seq5656 Length=255 Score = 98.7 bits (108), Expect = 3e-16 Identities = 173/252 (69%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 45646 CTATTTGCAGGAGAATGGTGTGACGATTTGGGACGAGTGGGCCGATGAAAACGGCGATCT 45705 |||| || |||| ||||| |||| ||| ||||| || ||||| || ||||| || ||| | Sbjct 254 CTATCTGAAGGAAAATGGCGTGAAGATCTGGGATGATTGGGCTGACGAAAATGGTGATTT 195 Query 45706 CGGCCCAATCTACGGCGCGCAATGGCGGTCGTGGAAAGGGGCTGACGGGAAAACGGTCGA 45765 || || | ||||| | |||||||| | ||| ||| | | || | | | | || Sbjct 194 GGGTCCGGTATACGGATCTCAATGGCGCACTTGGGAAGCACCCAATGGAGAGAAGATTGA 135 Query 45766 CCAAATTGCGGCGGTCTTTAAGGAAATCAAGCGCAACCCGAACTCGCGGCGGTTGCTTGT 45825 || ||||| || || || | ||| || ||| ||| | || || || || || Sbjct 134 TCAGATTGCAGCTGTAATTGATTCAATTAAAAACAATCCGGATTCACGACGTCACCTCGT 75 Query 45826 GAGCGCGTGGAACGTGGCAAAGTTGGGGGAAATGAAGTTGCCCCCATGTCATTACGCCTT 45885 ||||| ||||| ||||| || | | ||||| ||||||| || |||| ||| || Sbjct 74 TAGCGCCTGGAATGTGGCGGAGATTAACAACATGAAACTGCCCCCTTGCCATTTCGCGTT 15 Query 45886 TCAGTTTTACGT 45897 |||||||||||| Sbjct 14 TCAGTTTTACGT 3 >seq6680 Length=1954 Score = 80.6 bits (88), Expect = 8e-11 Identities = 127/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 35811 CAACTGAACCGGGCAGTGGAGCAAAGGGCGGACAAACGCCCGACGATGGCAGACCTTCGA 35870 || |||| ||||| || |||||| | ||| ||||| |||| |||| ||| | || Sbjct 1952 CAGCTGAGCCGGGGTGTAGAGCAACGTCAGGATAAACGTCCGATGATGAGTGACTTGCGG 1893 Query 35871 GAGTCGGGAAGCATCGAGCAAATTGCTGATTTGATTGCCTTCCTGTACCGCGAGGACTAT 35930 || |||||| ||||||||| |||||| | | || ||||||||||| || ||||| Sbjct 1892 GAATCGGGATCGATCGAGCAAGATGCTGACATCGTAGCGTTCCTGTACCGGGATGACTAC 1833 Query 35931 TACAATCGGGACGCTGAACAAACAGGAATCACAGAAATTATTGTTGCCAAAAACCGTAAC 35990 || || | ||| | || | | | || | || |||||| | |||||| | ||||| Sbjct 1832 TATAACCAGGAGACCGAGAAGAAAAACATTATCGAGATTATTATCGCCAAACAGCGTAAT 1773 Query 35991 GG 35992 || Sbjct 1772 GG 1771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157735992557374