Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq5592 96.9 4e-15 >seq5592 Length=112189 Score = 96.9 bits (106), Expect = 4e-15 Identities = 165/237 (70%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 138180 GCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTA 138239 || ||||| ||||| || || ||||| || || || || |||||||||||||| |||||| Sbjct 20299 GCAACACCGATAGGTCCGACACCAGGTCCGCCTCCACCGTGTGGAATACAGAAGGTCTTA 20358 Query 138240 TGTAAATTTAGATGACATACATCTGCACC-ATAGTCACATGGTTTTGCTAGACCTACCTG 138298 || | || ||||| || ||||| || || || || | ||| | || || | ||| Sbjct 20359 TGCAGGTTCAGATGGCACACATCCGCGCCAATTGT-TCCTGGAGAAGTGAGGCCGATCTG 20417 Query 138299 TGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACA 138358 || || | |||||| ||||| | || ||||| || |||| | || || | | || Sbjct 20418 AGCGTTCATATTTGCGCCATCCATGTAGACCTGCCCGCCATAATGGTGGACAAGATCGCA 20477 Query 138359 TATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAAT 138415 | || ||| | || ||||| ||||| |||||||||||||| | ||| || Sbjct 20478 GACCTTCTTGACTTCTGGCTCAAACACACCGAACGTCGATGGATATGTTACCATGAT 20534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578942736541320