Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq379 208 9e-49 seq5890 84.2 3e-11 seq2482 84.2 3e-11 >seq379 Length=54504 Score = 208 bits (230), Expect = 9e-49 Identities = 889/1385 (64%), Gaps = 31/1385 (2%) Strand=Plus/Plus Query 75221 ATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACA 75280 ||| ||||||| || || ||||||| ||||||||||||||||| | | | |||||| Sbjct 4482 ATGATCATGCGTGTGGCTGTCGGCATTCACGGGGAAGACATTGAAGCAGCGATCGAGACA 4541 Query 75281 TACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 75339 ||| || | ||||| | ||| |||| || || | ||||| || |||| |||||| Sbjct 4542 TACAACTACATGTCGTTGAAGTAC-TTCACACATGCTTCGCCAACACTTTTCAGTGCTGG 4600 Query 75340 TACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAA 75399 ||| ||| ||||| | | |||||| | | |||| ||||| ||| || | Sbjct 4601 TACCCCACAGGCGCAGCTAGCATCCTGCTTCTTGGTGGCCATGAAGGATGACAGCATTGA 4660 Query 75400 CGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGG 75459 |||||||| | || || | | ||||| ||||| ||| ||||| |||||||| Sbjct 4661 TGGTATCTACGACACCCTCAAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTATTGG 4720 Query 75460 GATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGACAAATGGTCAA 75517 | || | || | | || || | | ||| || || | || ||||| || | Sbjct 4721 TCTTCATGTTCACAACATCAGGGCTAC--AGGCTCATACATTGGCGGCACAAACGGCACA 4778 Query 75518 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 75577 || | ||| || | |||||||| || || | ||| ||| || || || || | || Sbjct 4779 TCCAACGGTCTTGTACCAATGCTACGAGTCTACAACAACACTGCACGTTACGTTGACCAG 4838 Query 75578 GCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGAT 75631 | || ||||| ||| | | | || ||||| | || || ||||| || || Sbjct 4839 GGTGGCAACAAGCGTCC--AGGTG-CTTTTGCCATCTACCTTGAGCCGTGGCACGCAGAC 4895 Query 75632 ATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGAT 75691 ||||| ||||| | || | || ||||| || | ||||| | ||| | ||| Sbjct 4896 GTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCGTGCGCGCGAT 4955 Query 75692 CTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAA 75751 | || | | || |||||||| || || || ||| |||| || || || || Sbjct 4956 TTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACAGAACGGCACT 5015 Query 75752 TGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTT 75810 ||| |||| | || || || || || || ||||| || || | ||||| ||||| Sbjct 5016 TGGACTCTAATGTGCCCCAACGAATGC-CCTGGTCTGTCGGATGTCTACGGTGACGAGTT 5074 Query 75811 TGAAGCCCTCTACACAAAGTATGA-AGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCG 75869 | | || ||| ||||| |||| ||| || ||| || ||| || | || Sbjct 5075 CAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCG-TGAGACGGTTCGTGCTC 5133 Query 75870 CCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTT 75929 | | ||| | ||||||||| | | ||||| ||||| || ||||| | || || | Sbjct 5134 AGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTCTGT 5193 Query 75930 ACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAA 75989 ||||||| || ||| ||||| ||||| |||||| | || || ||||||||||| | Sbjct 5194 ACAAGGACGCCGCCAACCGCAAGAGCAACCAGAAGAATCTTGGCACCATCAAGAGCTCTA 5253 Query 75990 ATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGG 76049 || | ||||| || || | |||||| | | | ||||||| ||||| |||||| ||| Sbjct 5254 ATTTGTGCACTGAGATCATGGAGTACTCTGCTCCGGATGAGGTCGCTGTCTGCAATCTGG 5313 Query 76050 CATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAAC 76109 | || | || || || | || ||| | |||| |||||| | | |||| Sbjct 5314 CTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGTTTTTGACTTCAAGAAAC 5373 Query 76110 TTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTT 76169 |||| || |||| || | || || || || ||| ||| || | || | | Sbjct 5374 TTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGACCATCGAGATCAACTACT 5433 Query 76170 ATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTT 76228 | || || ||| || |||||| || | || ||| |||| |||||| | ||||| Sbjct 5434 ACCCGGTACCAGA-GGCACGAAAGAGCAACTTCCGCCACCGACCCATTGGTCTTGGTGTC 5492 Query 76229 CAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAG 76288 | ||||| || |||| || | |||| |||| || || ||| |||||| Sbjct 5493 AACGGTCTTGCTGATGCCTTCTTGGCTCTCCGCATGCCATTCGACTCGCCTGAGGCCAAG 5552 Query 76289 GAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAA 76348 ||| | || | || ||||| ||||| ||||| || | || ||||| || || Sbjct 5553 GAGCTCAACATCCAGATTTTTGAGACCATCTATCATGCTGCTCTTGAGGCTTCATGCGAG 5612 Query 76349 TTGGCT--GAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGG 76406 | ||| ||||| | ||| | || ||||||| || ||||| | || || || | Sbjct 5613 CTTGCTGAGAAGCTC--GGTCCTTACGAGACATACCCAGGCTCTCCAGTATCGCAGGGCG 5670 Query 76407 TGCTTCAGTTTGATATGTGGG--AAG-GTGAAACCAAGCTCAACTACGACTGGGATGTTC 76463 ||| |||| || ||||||| ||| | ||| | || || ||||||| | | Sbjct 5671 AGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCT---CTGGGACTGGGCCGCAC 5727 Query 76464 TCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAA 76523 |||||| ||| || | ||| | || ||| ||| | | || || ||||||| Sbjct 5728 TCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTCTCGTTGCGCCGATGCCAA 5787 Query 76524 CAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACA 76583 ||||||| ||| | || ||| |||| ||| || ||||| || |||||||||| |||| Sbjct 5788 CAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCTTCGAGCCATACACAAGCAACA 5847 Query 76584 TCTAC 76588 | ||| Sbjct 5848 TTTAC 5852 >seq5890 Length=2317 Score = 84.2 bits (92), Expect = 3e-11 Identities = 339/528 (64%), Gaps = 12/528 (2%) Strand=Plus/Minus Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374 || ||||| || || ||| | ||||| || || | || ||||| | ||| |||||| Sbjct 1575 CCGGGTACAGGTAAAACCTTGCTCGCTCGTGCTGTTGCCGGTGAGGCGGGTGTACCATTC 1516 Query 175375 ATC--CAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGG 175432 || || | || | | |||| || || |||||||| ||||| ||||| | | Sbjct 1515 TTCAGCATT--TCCGGTTCTGACTTCGTTGAAATGTTTGTCGGTGTCGGTGCATCTCGTG 1458 Query 175433 TTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGA 175492 | || || | ||||||| || |||| |||||||| |||| || ||||| | Sbjct 1457 TACGTGACTTGTTTGAAAATGCGAAGAAAAACGCCCCATGTATCATCTTTATCGATGAAA 1398 Query 175493 TTGATGCGGTGGGCAAGCAACGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGAAC 175552 |||||||||| || || || | |||||| | | | ||||| | |||| Sbjct 1397 TTGATGCGGTAGGACGTCAGCGTGGTGCTGGTCTTGGTGGTGGTCACGACGAACGTGAAC 1338 Query 175553 AAACAATTAATCAACTACTCACCGAGATGGATGGCTT---TGACAATGAGACTGGCATTG 175609 ||||| | || || | ||| || |||||||| || | |||||| || ||| Sbjct 1337 AAACACTCAACCAGTTGCTCGTTGAAATGGATGGTTTCGGAGCCAATGA---AGGTATTA 1281 Query 175610 TGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGTC 175669 | | |||| || || || || | || || || || ||| | || || || || | Sbjct 1280 TCATCGTTGCAGCTACGAACCGTGCAGACATTCTGGACCCTGCCTTGCTGCGTCCAGGAC 1221 Query 175670 GTTTTGATCGCAAGATCCAAGTGGGTCTTCCAAGTGTGCGAGGTCGCAAGAAGATTTTGG 175729 ||||||| || | || |||| || || ||| ||||||| | | || || Sbjct 1220 GTTTTGACCGTCAAATTACGGTGGATCGCCCTGACGTGAGAGGTCGTGAAGCGGTTCTGA 1161 Query 175730 GAGTCCATGCCCGAGACAAG-AAGTTATCTGAAGATGTCAGTCTCGCGAGTATTGCCAAG 175788 ||| || | || ||||| | ||| | ||||||| | || | | ||||| ||| Sbjct 1160 AAGTACACTCACGCAACAAGCCACTTA-CCAAAGATGTGAAGCTGGACATCATTGCGAAG 1102 Query 175789 CAAACAACTGGATTCTCTGGTGCGGAGTTGGCAAACCTTCTCAATGAA 175836 | || || |||||||| ||||| || |||| ||| || || |||||| Sbjct 1101 CGTACTACGGGATTCTCCGGTGCAGATTTGGAAAATCTCCTGAATGAA 1054 >seq2482 Length=248254 Score = 84.2 bits (92), Expect = 3e-11 Identities = 220/327 (67%), Gaps = 14/327 (4%) Strand=Plus/Plus Query 13571 GACGCGAACAAGGCGGGTACG--GCACAATCTGGAAAGTGTACTCTCATTGTCACAGAGG 13628 ||||| |||||||| |||||| | || || ||||| || ||||| | ||||| | Sbjct 17505 GACGCCAACAAGGCCGGTACGAAGGACGGTCAC--AAGTGCACGCTCATCTTGACAGAAG 17562 Query 13629 GTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTCTGTCGTTGGTCGTGATCACTACG 13688 |||| || || || || |||| || | |||| || | || | | | Sbjct 17563 GTGACTCTGCCGCCTTGCTTGCTCTTGCAGGGCGAGCTGTTGTCAACCCAGACCTGTTTG 17622 Query 13689 GTGTGTTCCCACTTCGCGGTAAATGTAAGAATGTTCGGGACGCTTCGGTGGCACAGCTCA 13748 |||| ||||||||||| ||||| | ||||| || || ||||| | | ||| | Sbjct 17623 GTGTCTTCCCACTTCGTGGTAAGATTCTCAATGTGCGCGATGCTTCCATCGACCAGATTT 17682 Query 13749 CATCAAACCAGGAG-TTCAACGATC-TCAAGAAGATCCTTGGTCTTCAACAAGGAAAAGA 13806 || ||| ||| |||| || | |||||||| | || ||||| ||||| || || Sbjct 17683 CAAGGAACGCCGAGATTCA--GAACATCAAGAAGTTTCTGGGTCTGCAACATAAGAAGGA 17740 Query 13807 CTACCAAGATGTTTCTGAA--CTT-CGCTATGGTCGTCTTATGATTATGACAGATGCCGA 13863 |||| |||| || || ||| || ||||| | ||| ||||| ||||| ||| || Sbjct 17741 CTACACAGATA---CTAAAGGCTTGCGTTATGGCCATCTGATGATCATGACCGATCAGGA 17797 Query 13864 TAATGATGGTTCTCACATCAAGGGTCT 13890 | | ||||| ||||||||||||||||| Sbjct 17798 TCACGATGGCTCTCACATCAAGGGTCT 17824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596512247290080