Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq379 147 6e-30
seq3554 123 7e-23
seq3232 105 2e-17
seq5890 93.3 1e-13
seq3374 86.0 2e-11
>seq379
Length=54504
Score = 147 bits (162), Expect = 6e-30
Identities = 555/865 (64%), Gaps = 7/865 (1%)
Strand=Plus/Minus
Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699
|||||| ||||| ||||| |||||||||||||| | |||||||||||| || | |
Sbjct 5269 ATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGG 5210
Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759
|| || |||||||| |||||| | || || || ||||| |||| || || |||||
Sbjct 5209 TTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATA 5150
Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819
||| | | | ||| || || | ||||||| |||||| |
Sbjct 5149 GCATACCATATTTTCTGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCATAACGC 5090
Query 155820 ATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGG 155879
|||||| | | || |||||||| ||| ||| |||||||| | | ||||
Sbjct 5089 TCGTACAGCTCCTTGAACTCGTCACCGTAGACATCCGACAGACCAGGGCATTCGTTGGGG 5030
Query 155880 CAAAACAGCGACCAAATTTTATTACCGATT-ACACGCTCCATAAATACATCACTCGCCCA 155938
|| | || | |||| | || | | | ||||||| |||||| | ||| |||
Sbjct 5029 CACATTAGAGTCCAAGTGCCGTT-CTGTTCGACACGCTGCATAAAGAGATCGGGAATCCA 4971
Query 155939 AATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTC 155998
| ||| ||||| | || | || || || | || || ||||| || || ||
Sbjct 4970 GAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTC 4911
Query 155999 TAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC---ATT 156055
| ||| | | | || | || ||||| || || || |||||| ||| |
Sbjct 4910 CATGAACTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACG 4851
Query 156056 CCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAAT 156115
| | ||||||||||| || || || || ||||| || ||| |||| | |||||| || |
Sbjct 4850 CTTGTTGCCACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCATTGGTAC 4791
Query 156116 AATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATG 156175
|| ||| ||||| ||||| || || |||| ||| | || || | | | | || ||
Sbjct 4790 AAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTAGCCCTGATGTTGTG 4731
Query 156176 AATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATT 156235
|| ||| || |||||||| || | || || || || ||| ||| | || |
Sbjct 4730 AACATGAAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTGTC 4671
Query 156236 GAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGG 156295
| | ||||| ||||| ||||| | ||| | | | |||| || || || |
Sbjct 4670 GTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGC 4611
Query 156296 TCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355
|||| || ||||| |||| ||||| || | ||||| | || ||||| |||||
Sbjct 4610 CTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACAT 4551
Query 156356 ATAATCGTATGTCTCCTTAATCTTC-TCAAGATTAGACCCGTGAATACAGATAGAGACCC 156414
|| | ||||||||| | || | |||| | ||||||||| | || || || |
Sbjct 4550 GTAGTTGTATGTCTCGAT-CGCTGCTTCAATGTCTTCCCCGTGAATGCCGACAGCCACAC 4492
Query 156415 TCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGC 156474
||| ||| || || || | ||| ||| | |||||||||| |||||||||| |
Sbjct 4491 GCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCATCAATTCTGAGAAGGTATGATC 4432
Query 156475 GTTCCAGAGTTTTAAACCCGAAATA 156499
| |||||||| || || ||||| ||
Sbjct 4431 GCTCCAGAGTCTTGAAGCCGAAGTA 4407
>seq3554
Length=66956
Score = 123 bits (136), Expect = 7e-23
Identities = 174/241 (72%), Gaps = 4/241 (2%)
Strand=Plus/Minus
Query 302563 ATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTT 302622
||||| | ||||||| | ||| | || ||||||||| || |||||||| | ||
Sbjct 35799 ATCATGACTTCTTCCAAAGCCTTCACTAGACGACGCTGGATGTAACCAGTCTCTGCAGTC 35740
Query 302623 TTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCC 302682
|| ||||| |||||||| ||||| ||||||||||||| || |||||||| | |||||
Sbjct 35739 TTGACAGCGGTATCAATGAGACCTTCACGACCACCCATGGCGTGGAAGAAGAACTCTTGG 35680
Query 302683 GGTCGT--AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGT 302740
||| || |||| | | | | ||| |||| |||||||| || | | ||||| | ||
Sbjct 35679 GGT-GTCAAGCCACGC-AGGTATGAGTTCTCGACGAAACCTCGAGATGCAGGCGAGTAGT 35622
Query 302741 CGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCAT 302800
|| ||||| ||| || |||||| | || || ||||| | |||| |||||| || |
Sbjct 35621 CGTCCTTGGGAAAATGCGGCAGGACTCGGTACTTGAAGCCGAACGGGAGACGCTTGCCTT 35562
Query 302801 C 302801
|
Sbjct 35561 C 35561
>seq3232
Length=165148
Score = 105 bits (116), Expect = 2e-17
Identities = 115/150 (77%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
|| ||||| ||||||||| |||||| || || || |||||||| ||||| ||| | ||
Sbjct 141751 TGAGCGATTGTCATACGAGAGGGAATGGCGTGAGGGTTGATGATAATGTCCGGTGTGAGG 141810
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957
|| || || ||||| ||||| || | || || ||| || | |||| || ||||| ||
Sbjct 141811 CCGTCCGCTGTGAATGGCATGTCTTCTTG-TCGATAGGTGATACCAACGGTACCCTTCTG 141869
Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987
|||||||||||| ||||||||||||||
Sbjct 141870 TCCGTGACGAGATGCAAACTTATCACCAAT 141899
>seq5890
Length=2317
Score = 93.3 bits (102), Expect = 1e-13
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089
|| || ||||||||||| || || || || | ||| || | |||| ||||| || ||
Sbjct 1385 CCTACCGCATCAATTTCATCGATAAAGATGATACATGGGGCGTTTTTCTTCGCATTTTCA 1444
Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149
|| || || | |||||| ||||| || | ||| ||| ||||||| || || |||||| ||
Sbjct 1445 AACAAGTCACGTACACGAGATGCACCGACACCGACAAACATTTCAACGAAGTCAGAACCG 1504
Query 289150 GATA-CTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208
|| | |||| ||||| |||| || || || || || || | || || | || ||
Sbjct 1505 GAAATGCTGAA-GAATGGTACACCCGCCTCACCGGCAACAGCACGAGCGAGCAAGGTTTT 1563
Query 289209 ACCTGTTCCAGGTGGTCC 289226
|||||| || || || ||
Sbjct 1564 ACCTGTACCCGGAGGACC 1581
>seq3374
Length=191410
Score = 86.0 bits (94), Expect = 2e-11
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 302573 CTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTG 302632
||||||| | |||||| |||| | ||| | || |||| | ||| ||||| || ||||
Sbjct 174170 CTTCCATGCCCTTGATCAAACATCTCTGCAGGTATCCAGATCGAGACGTTTTGACTGCTG 174229
Query 302633 TATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCG 302687
||||||| ||||| | |||||| ||||||| |||||||| ||||| |||||
Sbjct 174230 TATCAATGAGACCTTCGCGACCAGCCATAGCGTGGAAGAAGTACTCTTGAGGTCG 174284
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471672565713867
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |