Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_021531.1 Length=223989 Score E Sequences producing significant alignments: (Bits) Value seq6046 107 3e-18 >seq6046 Length=863 Score = 107 bits (118), Expect = 3e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 99708 TTCGTCTGGACCGGCGGTGATGTGCATCTGTATTCTAACCATCTGGAACAGGCACGTACT 99767 ||| ||||| |||| || ||||| || | || || |||||| ||||||| | || Sbjct 863 TTCATCTGGTCCGGTGGGGATGTACACATCTACTCAAACCATGTGGAACAAGTGAAAACC 804 Query 99768 CAGTTAGGTCGTACTCCGCGTGCGTTGCCTAAGCTGATTATCAAACGTAAGCCGGACTCT 99827 ||||| | ||| || || |||||||| ||| | ||||| ||||||||||| || Sbjct 803 CAGTTGGAGCGTGAACCATACGCATTGCCTAAACTGGTCATCAAGCGTAAGCCGGATTCC 744 Query 99828 ATCTTCGACTATAAGTTCGAAGATTTTGATATCGAAGGCTACGACCCACACCCGGCTATT 99887 || || || |||| ||| ||||||||||| | || |||| | | || |||| |||| Sbjct 743 ATTTTTGATTATACGTTTGAAGATTTTGAGTTTGAGAACTACCAGCACCATCCGGGTATT 684 Query 99888 AAAGCACCGGTGGCGATATGAGTA 99911 ||||| ||| | || ||| |||| Sbjct 683 AAAGCCCCGATTGCAGTATAAGTA 660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716567904329640