Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq3971 114 1e-20
>seq3971
Length=130023
Score = 114 bits (126), Expect = 1e-20
Identities = 197/286 (69%), Gaps = 0/286 (0%)
Strand=Plus/Minus
Query 34319 CAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCA 34378
||||||| ||||| | || ||| || | || |||||| |||||| ||||| ||
Sbjct 35176 CAGTCTCGGGGTTCTTGCAGTCCTTGCAGAGGACGAACTTGTTGATGAAGCCATCGAGGT 35117
Query 34379 GGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAAT 34438
||| || ||||| | || || | ||||||| ||| | || |||| ||| |
Sbjct 35116 AGTCTTGCAACTTGGTAGCCTCATGTGCACCGTTGATGATCCAGCGGTCGTCCTTGGGGT 35057
Query 34439 CGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGAC 34498
| | | || || ||||| |||||| | || |||||||| | || | | ||| |
Sbjct 35056 CAATATTGGTCTGGGCGCCGAGCTCGAAACCAAAGTACTTGATGACATAGCTTGGCGGGC 34997
Query 34499 GTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCT 34558
| | ||| | |||| | || || |||||||| |||||||||||| ||||| ||||
Sbjct 34996 GGGCGAGCTGGTAAGCGACGTTGGCCAGGTTGACGACGACAGTCTTGATACCGTTACCCT 34937
Query 34559 TTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAA 34604
| || || ||||||| ||||||| ||| ||||||||||||||
Sbjct 34936 TCCCCTCTACCTTGGACTGGATGCGCTCCATCTTGTAGCGGTAGAA 34891
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412802902679663
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |