Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq5785 150 3e-30 seq4637 138 2e-26 seq6817 120 5e-21 seq4786 118 2e-20 seq379 89.7 8e-12 seq6270 86.0 1e-10 >seq5785 Length=148553 Score = 150 bits (166), Expect = 3e-30 Identities = 176/235 (75%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| |||||||| ||||| || ||||||||| |||| ||||| ||| ||| Sbjct 138305 GTACTTGGTGACAGCCTTGGTGCCCTCAGACACGGCGTGCTTGGCAAGTTCACCGGGCAG 138364 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 |||||| ||||||| |||||||| ||||| | ||| || |||||| || | Sbjct 138365 GATCAGTCGCACGGATGTCTGGATTTCGCGCGATGAGATGGTCGACTTCTTGTT-GTATG 138423 Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || | |||||||| | | ||| |||| ||||||||||| || ||||||| Sbjct 138424 CAGCGAGCTTGGATGCCTCGGTTGCAACGCGCTCGAAGATGTCGTTGACGAAAGAGTTCA 138483 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||| ||||| | ||||||||| || ||| ||||| ||||||||||| || Sbjct 138484 GGATGGACATGGCGCGGTTGGAGATACCGGTGTCTGGGTGAACCTGCTTGAGGAC 138538 >seq4637 Length=70287 Score = 138 bits (152), Expect = 2e-26 Identities = 322/481 (67%), Gaps = 6/481 (1%) Strand=Plus/Minus Query 2018914 TCCCGTGGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACG 2018973 |||| || | |||||||||||||| | ||||||||||| || |||||| | Sbjct 64948 TCCCTAGGGTTGAAAAGTACCGCCCCGTCTTCCTCGACGACATAGTCGGCAACACCGAAA 64889 Query 2018974 CCGTTGCCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCGG 2019033 || | | |||||| | ||| || ||||||||||| || | | | ||| Sbjct 64888 CCATCGAACGCCTCAAAATCATCGCCAAAGATGGCAACATGCCACACGTAATCATCTCGG 64829 Query 2019034 GCCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCG 2019093 || |||||| | ||||| ||||| || ||||| |||||| || || ||| Sbjct 64828 GCATGCCCGGAATCGGCAAAACCACCTCAGTCCTCTGCCTCGCGCGCCAACTGTTAGGCC 64769 Query 2019094 CGGCCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCG 2019153 | ||| | | || ||||| ||||||||||| || || ||||||||||| | ||||||| Sbjct 64768 CAGCCTACAAAGAAGCCGTCCTCGAACTCAACGCCTCCGACGAGCGCGGAATCGACGTCG 64709 Query 2019154 TGCGTAGAATCATCAA--GCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCA 2019211 | || | |||||| || || ||| ||||| || || || |||| || || Sbjct 64708 TACGAAACCGCATCAAGGGCTTCGCGC--AGAAAAAGGTCACACTCCCCGCCGGGCGGCA 64651 Query 2019212 CAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCG 2019271 ||| | | || | || || || || || | || || | || |||||||| || || Sbjct 64650 GAAGATTGTAATTTTAGACGAAGCAGATAGCATGACTTCAGGAGCGCAGCAGGCACTGCG 64591 Query 2019272 ATCG-ACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGT 2019330 ||| || ||||||| |||| || |||||| || || || | || |||||| ||| Sbjct 64590 -TCGAACGATGGAAATCTACAGCAGCACGACCCGCTTCGCCTTCGCTTGCAACCAATCGA 64532 Query 2019331 CGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCG 2019390 | ||||||| | ||||| || ||||| ||||| |||| ||||| ||||||| Sbjct 64531 ACAAAATCATCGAGCCTCTCCAATCGCGCTGCGCAATCTTACGCTACGCGCGACTCACCG 64472 Query 2019391 A 2019391 | Sbjct 64471 A 64471 >seq6817 Length=715036 Score = 120 bits (132), Expect = 5e-21 Identities = 181/257 (70%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| |||||||| || ||| |||||| |||||||||||||| | | Sbjct 196213 TGACACCAGCCTTCTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCA 196272 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 |||| || |||||| | ||| ||||||| | |||| ||||| | |||| Sbjct 196273 GCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGA 196332 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | || ||||| |||||||||||||||||||| || |||||||| | ||||||| Sbjct 196333 GTGCCAACAGTAGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCA 196392 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 | || | ||| || || | || | | ||||| | ||| ||| |||||||| Sbjct 196393 TCCCCAGAAGCTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCAATCGTGACGGCCT 196452 Query 794131 CG---ATGATGATCTGC 794144 || |||||| ||||| Sbjct 196453 CGGTAATGATGCTCTGC 196469 >seq4786 Length=180936 Score = 118 bits (130), Expect = 2e-20 Identities = 104/130 (80%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 2035632 TTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGC 2035691 || ||| | |||||||||||||||||| | || |||||| | || ||||| | || ||| Sbjct 20327 TTCGAGATCATCCTCGCCGCCAACTACATGGATATCAAGGCTCTTCTCGACGTCGGCTGC 20268 Query 2035692 AAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAAC 2035751 ||||| || |||||| | ||||||||||||||||| || || ||||| ||||| || ||| Sbjct 20267 AAGACAGTCGCCAACATGATCAAGGGCAAGTCGCCAGAAGAGATCCGAAAGACGTTCAAC 20208 Query 2035752 ATCAAGTACG 2035761 || || ||| Sbjct 20207 ATTCAGAACG 20198 >seq379 Length=54504 Score = 89.7 bits (98), Expect = 8e-12 Identities = 137/190 (72%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 2069603 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTG-ATG 2069661 ||||||| || || ||||| | | ||| || || | ||| |||||||| ||| ||| Sbjct 5892 GGTTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATG 5833 Query 2069662 ACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCC 2069721 | ||| | |||| | ||||| ||||||||| |||| ||| || ||||| |||| Sbjct 5832 GC-TCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCA 5774 Query 2069722 ACGAGCAGCGAGTTGCGCAGGCCGTACT-GTCGCACCAGCGCCCGCAGGGCGTCCCAGTC 2069780 ||||| ||||||||||||| |||| || | || | || || || ||| ||||||| Sbjct 5773 ACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGC-CCTTGAGTGCGGCCCAGTC 5715 Query 2069781 CCAGCGGCCG 2069790 |||| || || Sbjct 5714 CCAGAGGTCG 5705 >seq6270 Length=389597 Score = 86.0 bits (94), Expect = 1e-10 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 2175310 CGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGA 2175369 |||||| ||| |||||| || |||||||||||| ||||| || ||||| ||||| |||| Sbjct 231571 CGTCGATGTCTGGGTCGTTGATCAGGCCCTTCCAGCCGACTGTGGTGCGTGGCTTCTCGA 231512 Query 2175370 CATAGGCGCGCATGA 2175384 |||||||||||||| Sbjct 231511 GATAGGCGCGCATGA 231497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915428273251349