Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_022761.1 Length=146193 Score E Sequences producing significant alignments: (Bits) Value seq7001 84.2 2e-11 >seq7001 Length=2844 Score = 84.2 bits (92), Expect = 2e-11 Identities = 321/491 (65%), Gaps = 35/491 (7%) Strand=Plus/Plus Query 36685 ACGCATGGATCTTGTTAAGAAAGCATATTGGGTTCTCAGTAATCTTTACATTACTGTAGC 36744 ||| |||||||| |||||| |||| || |||| | || || | ||||| || | ||| Sbjct 775 ACGTATGGATCTCGTTAAGGAAGCTTACTGGGCAATGAGCAACATGTACATGACAGCAGC 834 Query 36745 TACACCCACAATGGGGAATGCAGGTAGACCAGATGGTCAGTTAAG-CTCG---TGTTTCA 36800 |||||| || ||| ||||| || | | || ||| | | || ||| || |||| Sbjct 835 TACACCTACGATGTCCAATGCGGGCAAAAAAG-TGGCCGGACAACTCTCCAGCTGCTTCA 893 Query 36801 TTGGAACAGTAGAAGATTCCCTAGACAATATCTATGATAATAACAAAGATTCAGCTATGG 36860 ||| || || || |||||||| || |||| ||| |||| ||| ||| | Sbjct 894 TTGATACCGTGGACGATTCCCTTGAGGGCATCTTCGATTCCAACACTGATGTAGC----G 949 Query 36861 TGTCTAAGT----TTGGTGGGGGTATCGGGGTTTACATGGGTAAAATCCGTTCACTCAAC 36916 |||| || | || || || ||||| |||||| | |||||| || | | | | Sbjct 950 CGTCTCAGCAAAATGGGCGGCGGCATCGGCGTTTACCTCGGTAAAGTCAGAGCTCGCG-- 1007 Query 36917 AGTT---ACATCCGTGGTATGAAAGGTA-AGTCTCAAGGTGTTATCCCTTGGAT---CAA 36969 ||| ||||||| ||| ||| || | ||| || || ||||||||||| | | Sbjct 1008 -GTTCGGACATCCGGGGTCACAAAAATACAAGCTCT-GGCGTAATCCCTTGGATTCGCCA 1065 Query 36970 AGGGCTTGAAAATACAGCAAATAGTGTAGACCAGCTAGGTCAGCGTAAAGGTGCTATTGC 37029 | || | ||||| || || ||||||||||| || ||||||||||| || || Sbjct 1066 A---CTAAATAATACTGCGGTCAGCGTAGACCAGCTTGGAACACGTAAAGGTGCGATCGC 1122 Query 37030 AGTTTACCTAGACATCTGGCATAAGGATGTTATGGAATTCCTGCAAATTGGTACT-AATA 37088 ||||| || ||| | | || || || | ||| ||||| | | || || || | Sbjct 1123 CGTTTATCTGGACGTTTTCCACAAAGACATCTTGGCCTTCCT-CGATCTGAAGCTCAACA 1181 Query 37089 ACGGGGATGA---GAGACGTAAAGCACGTGACGTATTCCCAGGCTTATGTGTACCAGACC 37145 | || || || || ||| || | ||||||||||| ||| | || | || |||| Sbjct 1182 ATGGTGACGAGCGGATGCGT---GCGCATGACGTATTCCACGGCATCTGCCTGCCTGACC 1238 Query 37146 TTTTCATGGAG 37156 | ||||||||| Sbjct 1239 TGTTCATGGAG 1249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 467644637491080