Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_022771.1
Length=156648
Score E
Sequences producing significant alignments: (Bits) Value
seq4937 140 3e-28
>seq4937
Length=774
Score = 140 bits (154), Expect = 3e-28
Identities = 394/592 (67%), Gaps = 21/592 (4%)
Strand=Plus/Minus
Query 90324 CTGCGGACTGGTCTAAACCAGACGATGACTTTACACAGATGTTTTACAACCAGAATGTCA 90383
||| | ||||| | | |||| ||||| || |||| ||||| | || |||||| | |
Sbjct 774 CTGTGAACTGGAATCGAGCAGATGATGATTTCACACTCATGTTCTGGAATCAGAATATTA 715
Query 90384 AACAGTTCTGGCTCCCAGAAGAAATTGCCCTTAACGG-TGACTTGCTTACTTGGAAGAAT 90442
|| || ||| | || || ||| || ||| | | ||| | || ||| |
Sbjct 714 TGCAATTTTGGACCGATGACGAGATT-CCTTTATCCGATGATAAAATGACCTGGGGCATG 656
Query 90443 CTTAGTG-TACAGGAACAAGATACTTATATGAAGGTTCTGGCTGGTCTTACATTACTAGA 90501
|| |||| ||||| || |||| |||||||||| ||| ||| || || || | || ||
Sbjct 655 CTCAGTGATACAGAAA-AAGACGCTTATATGAAAGTTTTGGGAGGCCTAACCCTTCTGGA 597
Query 90502 CACGGAGCAGGGGAACACAGGGATTCCTACCATTGCTGAACATATAAACGGACACCAGCG 90561
|| ||||| ||| || || ||| || ||| | | |||| |||||
Sbjct 596 TACCATTCAGGGCGGTGTAGGTATGCCGCAGATTATGGAGCATGTGGATGGACTACAGCG 537
Query 90562 AAAAGCCGTACTGAACTTCATGGCTATGATGGAAAACTCGGTGCATGCTAAATCGTACAG 90621
|| || ||||||| ||| ||||| ||||||||| | | ||||| ||||| |||||
Sbjct 536 CAAGGCTGTACTGAGCTTTATGGCGATGATGGAACAAA---TTCATGCGAAATCCTACAG 480
Query 90622 CAACATTTTCCTTACATTAGCACCTACTGAGAAAATTAATGAAGTATTCGAGTGGGTT-A 90680
|| ||||| |||||| || | || ||| ||||| | | ||||| | ||||| |
Sbjct 479 CAGTATTTTTACTACATTGGCCTCAACCGAGGAAATTGACAATGTATTTAAATGGGTGGA 420
Query 90681 AGAACAACAAATATCTTCAAAAGAAAGCGAAGATCATTGTATCTGT-TTACGAGAGTATT 90739
|||| | | | ||||| |||| ||||||| | | || || || ||| || |||
Sbjct 419 AGAAAATCCA-TATCTGCAAACCAAAGCGACGGTTATACG-TCAGTATTATATGAACATT 362
Query 90740 GAAAAAGGTAATGATGCTTCACTATTTATGGCTCTAGTAGCGTCTGTGTTCCTTGAAAGT 90799
|||| || ||| ||| |||||| | | || || || | | ||||||
Sbjct 361 GAAACTTCAAAAGATT------TATATATGGCGATGGCCGCTTCCGTACTTTTGGAAAGT 308
Query 90800 TTCTTGTTCTACAGCGGATTCTACTACCCGTTATACTTCTATGGTCAAGGTAAACTCA-- 90857
| ||||| ||||||||||||| |||||| | || || ||| |||||||||||||
Sbjct 307 TATTTGTTTTACAGCGGATTCTTCTACCCACTCTATTTAGCTGGACAAGGTAAACTCACC 248
Query 90858 TGCAGTCAGGAGAAATTATCAACCTGATTATCCGGGATGAAGCAATTCATGG 90909
|||||| || || || || | |||||| | ||||||||| ||||||||
Sbjct 247 TGCAGT--GGTGAGATCATTGATCTGATTCTGCGGGATGAAAGTATTCATGG 198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 501097421114880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |