Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_022771.1 Length=156648 Score E Sequences producing significant alignments: (Bits) Value seq4937 140 3e-28 >seq4937 Length=774 Score = 140 bits (154), Expect = 3e-28 Identities = 394/592 (67%), Gaps = 21/592 (4%) Strand=Plus/Minus Query 90324 CTGCGGACTGGTCTAAACCAGACGATGACTTTACACAGATGTTTTACAACCAGAATGTCA 90383 ||| | ||||| | | |||| ||||| || |||| ||||| | || |||||| | | Sbjct 774 CTGTGAACTGGAATCGAGCAGATGATGATTTCACACTCATGTTCTGGAATCAGAATATTA 715 Query 90384 AACAGTTCTGGCTCCCAGAAGAAATTGCCCTTAACGG-TGACTTGCTTACTTGGAAGAAT 90442 || || ||| | || || ||| || ||| | | ||| | || ||| | Sbjct 714 TGCAATTTTGGACCGATGACGAGATT-CCTTTATCCGATGATAAAATGACCTGGGGCATG 656 Query 90443 CTTAGTG-TACAGGAACAAGATACTTATATGAAGGTTCTGGCTGGTCTTACATTACTAGA 90501 || |||| ||||| || |||| |||||||||| ||| ||| || || || | || || Sbjct 655 CTCAGTGATACAGAAA-AAGACGCTTATATGAAAGTTTTGGGAGGCCTAACCCTTCTGGA 597 Query 90502 CACGGAGCAGGGGAACACAGGGATTCCTACCATTGCTGAACATATAAACGGACACCAGCG 90561 || ||||| ||| || || ||| || ||| | | |||| ||||| Sbjct 596 TACCATTCAGGGCGGTGTAGGTATGCCGCAGATTATGGAGCATGTGGATGGACTACAGCG 537 Query 90562 AAAAGCCGTACTGAACTTCATGGCTATGATGGAAAACTCGGTGCATGCTAAATCGTACAG 90621 || || ||||||| ||| ||||| ||||||||| | | ||||| ||||| ||||| Sbjct 536 CAAGGCTGTACTGAGCTTTATGGCGATGATGGAACAAA---TTCATGCGAAATCCTACAG 480 Query 90622 CAACATTTTCCTTACATTAGCACCTACTGAGAAAATTAATGAAGTATTCGAGTGGGTT-A 90680 || ||||| |||||| || | || ||| ||||| | | ||||| | ||||| | Sbjct 479 CAGTATTTTTACTACATTGGCCTCAACCGAGGAAATTGACAATGTATTTAAATGGGTGGA 420 Query 90681 AGAACAACAAATATCTTCAAAAGAAAGCGAAGATCATTGTATCTGT-TTACGAGAGTATT 90739 |||| | | | ||||| |||| ||||||| | | || || || ||| || ||| Sbjct 419 AGAAAATCCA-TATCTGCAAACCAAAGCGACGGTTATACG-TCAGTATTATATGAACATT 362 Query 90740 GAAAAAGGTAATGATGCTTCACTATTTATGGCTCTAGTAGCGTCTGTGTTCCTTGAAAGT 90799 |||| || ||| ||| |||||| | | || || || | | |||||| Sbjct 361 GAAACTTCAAAAGATT------TATATATGGCGATGGCCGCTTCCGTACTTTTGGAAAGT 308 Query 90800 TTCTTGTTCTACAGCGGATTCTACTACCCGTTATACTTCTATGGTCAAGGTAAACTCA-- 90857 | ||||| ||||||||||||| |||||| | || || ||| ||||||||||||| Sbjct 307 TATTTGTTTTACAGCGGATTCTTCTACCCACTCTATTTAGCTGGACAAGGTAAACTCACC 248 Query 90858 TGCAGTCAGGAGAAATTATCAACCTGATTATCCGGGATGAAGCAATTCATGG 90909 |||||| || || || || | |||||| | ||||||||| |||||||| Sbjct 247 TGCAGT--GGTGAGATCATTGATCTGATTCTGCGGGATGAAAGTATTCATGG 198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 501097421114880