Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_023610.1 Length=218339 Score E Sequences producing significant alignments: (Bits) Value seq5288 84.2 3e-11 >seq5288 Length=1523 Score = 84.2 bits (92), Expect = 3e-11 Identities = 91/119 (76%), Gaps = 4/119 (3%) Strand=Plus/Minus Query 87492 ACCCAGACGTGTCAGGAACATTTTCATCTGTGCCTTGGTTACGT--TCTGGGCTTCGTCC 87549 ||| ||||| ||||| ||||||||||||||| || ||| ||| |||||||||| ||| Sbjct 1072 ACCAAGACGGGTCAGAAACATTTTCATCTGTTCC--GGTGTCGTATTCTGGGCTTCATCC 1015 Query 87550 AGGATAACTACCGCGTTCTCAAACGTGCGGCCACGCATATACGCGAAGGGAGCAATTTC 87608 ||||||| | || | || | || || || |||||||| || | ||||||||||| Sbjct 1014 AGGATAATAAACGAATCATCCAGTGTACGTCCCCGCATATAGGCTAGAGGAGCAATTTC 956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 698489642495640