Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_023612.1
Length=39078
Score E
Sequences producing significant alignments: (Bits) Value
seq6680 100 7e-17
>seq6680
Length=1954
Score = 100 bits (110), Expect = 7e-17
Identities = 130/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 33217 AGCCGGAGCGTTGAGAACCGACAAGAAAAACGGCCGACAATGAGCGATTTGCGAGAAAGC 33276
|||||| | || ||| | || || || ||||| |||| ||||| || ||||| |||
Sbjct 1946 AGCCGGGGTGTAGAGCAACGTCAGGATAAACGTCCGATGATGAGTGACTTGCGGGAATCG 1887
Query 33277 GGCCAAATTGAGCAAGATGCCGATATAATACAATTTTTGTATCGTGATGATTATTATAAC 33336
|| || ||||||||||| || || || || |||| || ||||| || ||||||
Sbjct 1886 GGATCGATCGAGCAAGATGCTGACATCGTAGCGTTCCTGTACCGGGATGACTACTATAAC 1827
Query 33337 CCGGATACCGAAAATAAAAACATCATTGAGGTTATCGTGGCGAAACACCGAAACGGCCCG 33396
| ||| ||||| || |||||||| || ||| |||| | || ||||| || || || |||
Sbjct 1826 CAGGAGACCGAGAAGAAAAACATTATCGAGATTATTATCGCCAAACAGCGTAATGGTCCG 1767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124916590247680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |