Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_023612.1 Length=39078 Score E Sequences producing significant alignments: (Bits) Value seq6680 100 7e-17 >seq6680 Length=1954 Score = 100 bits (110), Expect = 7e-17 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 33217 AGCCGGAGCGTTGAGAACCGACAAGAAAAACGGCCGACAATGAGCGATTTGCGAGAAAGC 33276 |||||| | || ||| | || || || ||||| |||| ||||| || ||||| ||| Sbjct 1946 AGCCGGGGTGTAGAGCAACGTCAGGATAAACGTCCGATGATGAGTGACTTGCGGGAATCG 1887 Query 33277 GGCCAAATTGAGCAAGATGCCGATATAATACAATTTTTGTATCGTGATGATTATTATAAC 33336 || || ||||||||||| || || || || |||| || ||||| || |||||| Sbjct 1886 GGATCGATCGAGCAAGATGCTGACATCGTAGCGTTCCTGTACCGGGATGACTACTATAAC 1827 Query 33337 CCGGATACCGAAAATAAAAACATCATTGAGGTTATCGTGGCGAAACACCGAAACGGCCCG 33396 | ||| ||||| || |||||||| || ||| |||| | || ||||| || || || ||| Sbjct 1826 CAGGAGACCGAGAAGAAAAACATTATCGAGATTATTATCGCCAAACAGCGTAATGGTCCG 1767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124916590247680