Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq379 255 6e-63 seq260 143 3e-29 seq2864 89.7 5e-13 >seq379 Length=54504 Score = 255 bits (282), Expect = 6e-63 Identities = 1108/1729 (64%), Gaps = 35/1729 (2%) Strand=Plus/Minus Query 148061 CTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA-GTCGCTTTATCTTCATCT 148119 |||||| || || || ||||||||||| ||||| | | || || | | || |||| Sbjct 6089 CTGGTCGATAAAAGCACCACGGTCAGCAGCCATCTGCACGATGTTACGCTGGCTG-ATCT 6031 Query 148120 CCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCG 148179 ||||| | |||||||| || ||||| | || |||||| | ||||||||| | | Sbjct 6030 CCCAGACGGTCTTGTAGAGTGCCTTGAGGTCGTCTGGAATGTTGGGGATGCGCTGAATGG 5971 Query 148180 AGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCA 148239 |||| || || | || | || ||| | || | | ||| | |||| | Sbjct 5970 AGCCATTGTCAGCGATGATGCGGTTCTTCATGTTCTCTGACCACAGGCCACGGTCGACGA 5911 Query 148240 GGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGA- 148298 | || | | || | | || || ||||| |||||||| || | ||| || || ||| Sbjct 5910 GATCCTTCAGAAGCCATGGGTTGACGACCTGGAACTCGCCAGCCAACACACGACG-AGAG 5852 Query 148299 TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTT 148358 || | |||||| || | || || || ||||||| ||||| ||||||| ||||| Sbjct 5851 TAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAG 5792 Query 148359 GCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGC 148418 || || ||||| ||| || || ||||||||||||| |||| | | || |||| | Sbjct 5791 GCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCC 5732 Query 148419 TTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGA 148478 || || || |||||||||||||| | || ||| | ||||||||||||||| || Sbjct 5731 TTGAGTGCGGCCCAGTCCCAGAGGTCGGTAGGAGTCTTGCCCCACATGTCGTACTGGAGC 5672 Query 148479 ATGCCGCGGCTA-GCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAG 148537 ||| | || | | || ||| ||| | ||| || ||| || | | || || Sbjct 5671 TCGCC-CTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAGGACCGAGCTTCTCAGCAAG 5613 Query 148538 TTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAG 148597 ||||| ||||| || || | | || || ||||| ||| || |||||||| Sbjct 5612 CTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCAAAAATCTGGATGTTGAGCTC 5553 Query 148598 C---GCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCC 148654 | ||| | | | | ||| | ||||| || || || || || || ||||| || Sbjct 5552 CTTGGCCTCAGGCGAG---TCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACC 5496 Query 148655 CTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG-AGCG 148713 | || || | |||||||| ||||| | |||| || || |||| | | || Sbjct 5495 GTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTTGCTCTTTCGTGC-CTCTGGTACCG 5437 Query 148714 GATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGC 148773 | |||| |||| |||||| |||||| || || || ||||| || || | | Sbjct 5436 GGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGT 5377 Query 148774 GCAG------CAATTCAAAATCGTACTTGTC-ATCTACGATGCATCGGTTCACGGCGATA 148826 | || || |||||| | | || || || | ||| | | | || || | Sbjct 5376 GAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGT-CGACGTAGGTGGGCAGAGCAAGC 5318 Query 148827 GAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCAC 148886 || || |||||||| || || ||||||||| || |||||| | |||||| | |||| Sbjct 5317 GAAGCCAGATTGCAGACAGCGACCTCATCCGGAGCAGAGTACTCCATGATCTCAGTGCAC 5258 Query 148887 AGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCC 148946 | ||| || ||||| ||| | ||||| || |||||||||| |||| |||||| Sbjct 5257 AAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCC 5198 Query 148947 TTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTC--CACTATGAACCGATGCA 149004 |||||||| ||| | ||| ||| || || ||||| || | || | | || | Sbjct 5197 TTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCAT--A 5140 Query 149005 GGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAG--TATACAG 149062 | ||| || || || || | || | ||| || ||| |||| | ||||| Sbjct 5139 TTTTCTGAGCACGAACCGTCT-CACGGCCCTTGCCTTCT-CTCTCATAACGCTCGTACAG 5082 Query 149063 CCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAG 149122 | || |||| | || |||||| ||| ||||| ||||| | || |||||||| || Sbjct 5081 CTCCTTGAACTCGTCACCGTAGACATCCGACAGACCAGGGCATTCGTTGGGGCACATTAG 5022 Query 149123 CGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTA 149182 | ||| ||||| | | || |||| |||||| |||||||| | |||||| ||||| Sbjct 5021 AGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTA 4962 Query 149183 CATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCT 149242 | | |||||||| ||||| || ||| ||| |||| | | || Sbjct 4961 GAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGA-ACT 4903 Query 149243 GAAT-ATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGC 149298 | || | ||| |||||||||||||||| ||| | || | || || ||| |||| Sbjct 4902 GCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGC 4843 Query 149299 CGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCAC 149358 | |||||||| |||| || | ||||||| | ||||| | ||| ||| ||| || Sbjct 4842 CACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCATTGGTACAAGACCGT 4783 Query 149359 TGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGA 149418 ||| |||||||| || || |||| ||| || | | ||||| || | | Sbjct 4782 TGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTAGCCCTGATGTTGTGAACATGAA 4723 Query 149419 CGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGC 149478 || || ||||| ||| ||| ||||| || || ||| || |||||| | Sbjct 4722 GACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTGTCGTAGATAC 4663 Query 149479 CCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCG 149538 | || |||||||| |||||||| || || ||||| || | |||| | | Sbjct 4662 CATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGGG 4603 Query 149539 TGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGT 149598 | || || ||| | || || || ||||| || || ||| ||| | || Sbjct 4602 TACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACATGTAGTTGT 4543 Query 149599 ACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCA 149658 | | ||||| | | || ||||| || || || ||||| | || || ||||| | || Sbjct 4542 ATGTCTCGATCGCTGCTTCAATGTCTTCCCCGTGAATGCCGACAGCCACACGCATGATCA 4483 Query 149659 TATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAGTG 149718 | || ||||||| ||| || || ||| ||||| |||| | ||| || || | Sbjct 4482 TCTGTTGCGGTCTCTCGGCAACCTTGCCATCAATTCTGAGAAGGTATGATCGCTCCAGAG 4423 Query 149719 TCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGC 149767 ||||| |||| ||||| | ||||| ||||||||| | | | ||||||| Sbjct 4422 TCTTGAAGCCGAAGTATTGGTAGTTGAAGTCGCGGTCATAGACAATGGC 4374 >seq260 Length=339642 Score = 143 bits (158), Expect = 3e-29 Identities = 152/198 (77%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || |||||||| || ||||| ||| || || ||| | ||||||||||||||||| Sbjct 135644 GTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCA-TCCTCGAGCTGCTTGCC 135702 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || |||| || ||||||||||| || ||||| || |||||||| |||||| ||| Sbjct 135703 TGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTCGACTT 135762 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| ||| ||| || |||| ||||| ||| |||||||| ||||| Sbjct 135763 GACATTGTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGT 135822 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 135823 CTTGACGAAGATCTGCAT 135840 Score = 141 bits (156), Expect = 9e-29 Identities = 152/199 (76%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 |||||||| ||||| || |||||||| | | ||| || |||||| |||||||||| Sbjct 135416 GTGGACTCCTTCTGGATGTTGTAATC--CGAAAGTGTCCGGCCGTCCTCAAGCTGCTTGC 135473 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | ||||| ||||||||||| || |||||||| |||||||| ||||||| || Sbjct 135474 CGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGGATCTTTGACT 135533 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | |||||||| | ||||| |||| |||| || |||||||| || | Sbjct 135534 TGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGTGATAGTCTTGCCGGTGAGTG 135593 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || |||||||| ||||| Sbjct 135594 TCTTGACGAAAATTTGCAT 135612 Score = 100 bits (110), Expect = 3e-16 Identities = 125/169 (74%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| || ||||| ||| || ||| ||| |||||||||||||||||| ||| Sbjct 135877 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACC-GTCCTCGAGCTGCTTGCCTGCGA 135935 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 |||| | || |||||||| || || ||||||||||| || |||||| ||| | | Sbjct 135936 AAATCAAGCGTTGCTGGTCAGGTGGAATGCCTTCCTTATCCTGGATCTTGCTCTTCACAT 135995 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | ||||||| | ||| || |||| ||| | ||| |||||||| Sbjct 135996 TATCGATGGTGTCGGACGACTCAACCTCGAGGGTAATGGTCTTGCCGGT 136044 >seq2864 Length=266724 Score = 89.7 bits (98), Expect = 5e-13 Identities = 134/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 133465 TGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCC 133523 || || | ||||| || || || ||| | ||| ||| | ||||| | |||||| || Sbjct 247960 TGCACACCTTCTGGATGTTATAGTCGGAGAGGGTGCGACCA-TCCTCCAACTGCTTTCCA 248018 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || | ||||||||||| || ||||| || |||||||| |||||| |||| Sbjct 248019 GCGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTG 248078 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | |||||| | | ||| || |||| |||| ||| ||||| || || || Sbjct 248079 ACATTGTCGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTC 248138 Query 133644 TTTACGAA 133651 |||||||| Sbjct 248139 TTTACGAA 248146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483374325132840