Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq6817 183 4e-40 seq4637 123 4e-22 seq379 98.7 1e-14 >seq6817 Length=715036 Score = 183 bits (202), Expect = 4e-40 Identities = 359/515 (70%), Gaps = 28/515 (5%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||||||| |||||||| ||||||||||||||||| || ||||| || |||||| | || | Sbjct 197072 GATATGGCAAATGTAC-AAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATC 197014 Query 1455835 TCGGCGCCGACACGGTCCAC---TGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCA 1455888 | | || | | ||||| ||| || | | ||||||||| || |||| Sbjct 197013 T-GTCGAAGGATC--TCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCA 196957 Query 1455889 TCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCC 1455948 || ||||||||||| || || |||||| ||||||||| || ||||||||| | | Sbjct 196956 TCTCACACGTCCTCGCATTCTT-CGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTC 196898 Query 1455949 GGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008 | ||||| | ||||| || | || |||||||| | || ||||| ||||||||| Sbjct 196897 GAGCGCTTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATC 196838 Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068 || || ||||||||||| || || || || || || ||||| || ||| ||| || Sbjct 196837 ATGATGGAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAG 196778 Query 1456069 CCGGTCGAGAAG-GACC--ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAA 1456125 || || || || | |||| || |||||||||| | || | | | | Sbjct 196777 CC---AAAGCAGCGAACATACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGG 196721 Query 1456126 AAGGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182 ||||| ||||||||| || ||||| ||||| | ||||||| || ||| | Sbjct 196720 AAGGCTGACTGGGCGTTGCGATGGATTTCTGACAAGAA----CTCGACA-TTCGCCCTCC 196666 Query 1456183 GGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATC 1456240 | ||| ||| ||||||| ||| ||||||||||| ||||| || | || ||| || ||| Sbjct 196665 GTCTCATCGCATTTGCCGCCGTTGAGGGCATCTTCTTCTCTGG-ATCTTTTGCTGCTATC 196607 Query 1456241 TTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 || ||||| ||||| || || |||||| |||| || Sbjct 196606 TTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCT 196572 Score = 93.3 bits (102), Expect = 6e-13 Identities = 180/260 (69%), Gaps = 7/260 (3%) Strand=Plus/Minus Query 1456519 GCAGATCATCGT---CGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCC 1456575 ||||| |||| | |||||||||| ||| ||| | ||||| | | || | || || Sbjct 196469 GCAGAGCATCATTACCGAGGCCGTCACGATTGAGCAGGAGTTCTTGACAGACGCTCTTCC 196410 Query 1456576 GGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCC 1456635 ||| | || |||||||| | ||||||| || ||||||||||| |||||| Sbjct 196409 ATGCAAGCTTCTGGGGATGAACGCTGGC-CTCATGTCACAATACATTGAATTC-GTCGCC 196352 Query 1456636 GACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCC 1456695 || ||||| || ||| |||||| | ||||| |||| | ||||||| ||| Sbjct 196351 GATCGCCTACTGTTGGCACTCGGCAACA-AGAAGTTCTACAACGCCACCAACCCCTTCGA 196293 Query 1456696 ATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGA 1456754 | |||||| || ||||| | |||||||||||||| |||||| || | |||||| Sbjct 196292 CTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGA 196233 Query 1456755 GTACGCCAAGGCCGGCGTCA 1456774 |||| ||||| || |||| Sbjct 196232 GTACCAGAAGGCTGGTGTCA 196213 >seq4637 Length=70287 Score = 123 bits (136), Expect = 4e-22 Identities = 323/490 (66%), Gaps = 2/490 (0%) Strand=Plus/Plus Query 332847 CGATTTGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCT 332906 ||| ||| | || ||||| ||| | |||| | ||| || || || || || | || Sbjct 64460 CGACTTGCCCATCGGTGAGTCGCGCGTAGCGTAAGATTGCGCAGCGCGATTGGAGAGGCT 64519 Query 332907 CGATGACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTT 332966 |||||| | ||| |||||| || | ||| || || ||||| || | | ||| Sbjct 64520 CGATGATTTTGTTCGATTGGTTGCAAGCGAAGGCGAAGCGGGTCGTGCTGCTGTAGATTT 64579 Query 332967 CCATGGT-CGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGG 333025 |||| || |||| | || ||||| || || | | || | || || || ||||| | Sbjct 64580 CCATCGTTCGAC-GCAGTGCCTGCTGCGCTCCTGAAGTCATGCTATCTGCTTCGTCTAAA 64638 Query 333026 ATGATGATCTTGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATG 333085 || | ||||| || |||||| || || ||| ||||| ||| | |||||| Sbjct 64639 ATTACAATCTTCTGCCGCCCGGCGGGGAGTGTGACCTTTTTCTGCGCGAAGCCCTTGATG 64698 Query 333086 ATCTTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCG 333145 || || |||||||| | ||||||||||| || |||||||||||||| ||||| || Sbjct 64699 CGGTTTCGTACGACGTCGATTCCGCGCTCGTCGGAGGCGTTGAGTTCGAGGACGGCTTCT 64758 Query 333146 TCGGCGGCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTG 333205 | | ||| | || || || |||||| ||||| || ||||| ||||| | Sbjct 64759 TTGTAGGCTGGGCCTAACAGTTGGCGCGCGAGGCAGAGGACTGAGGTGGTTTTGCCGATT 64818 Query 333206 CCGGGCGGACCCGCCAGCAAGAGGTTGGGCATGTTGCCGTCGGCGGCCAGCGCCTTGAGG 333265 |||||| |||| | | | || ||||||||||| || ||| | |||||| Sbjct 64819 CCGGGCATGCCCGAGATGATTACGTGTGGCATGTTGCCATCTTTGGCGATGATTTTGAGG 64878 Query 333266 TAGGCAACGGCGTGCTCGTTGCCGACAATGTCGTCGAGCACCATTGGGCGGTACTTTTCG 333325 | | || | ||||||||| ||||||||||| | | |||||||||||||| Sbjct 64879 CGTTCGATGGTTTCGGTGTTGCCGACTATGTCGTCGAGGAAGACGGGGCGGTACTTTTCA 64938 Query 333326 ATCCATGGGA 333335 | || |||| Sbjct 64939 ACCCTAGGGA 64948 >seq379 Length=54504 Score = 98.7 bits (108), Expect = 1e-14 Identities = 366/559 (65%), Gaps = 30/559 (5%) Strand=Plus/Plus Query 262872 CGGCCGCTGGGACTGGGACGCACTGCGGGCGTCGGTTCGAC-AGCATGGCCTGCGCAACT 262930 || || ||||||||||| |||||| || | | ||| | |||| || ||||||||| Sbjct 5705 CGACCTCTGGGACTGGGCCGCACTCAAGG-GCAAGATCGCCCAGCACGGTGTGCGCAACT 5763 Query 262931 CGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGG 262990 || | ||||| |||| ||||| || ||| |||| ||||||||| ||||| | |||| Sbjct 5764 CGCTTCTCGTTGCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGT 5823 Query 262991 CGTTCGAGGTCAT-CACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACC 263049 ||||| | ||| ||| |||||||| ||| | || || ||| | | ||||| || Sbjct 5824 GCTTCGA-GCCATACACAAGCAACATTTACTCTCGTCGTGTGTTGGCTGGCGAGTTCCAG 5882 Query 263050 GTGGTCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTT 263109 || ||||||| || | ||| | || | || ||||||||| | || | Sbjct 5883 GTCGTCAACCCATGGCTTCTGAAGGATCTCGTCGACCGTGGCCTGTGGTCAGAGAACATG 5942 Query 263110 CGCGACCGGCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCG 263169 |||| |||| || | | ||||| | ||| || | | || | || Sbjct 5943 AAGAACCGCATCATCGCTGACAATGGCTCCATTCAGCGCATCCCCAAC------ATTCCA 5996 Query 263170 CCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACC-GGGTGAC--CATT 263226 ||| |||||||| |||| ||||||||| |||||| | || || | || || | | Sbjct 5997 GACGACCTCAAGGCACTCTACAAGACCGTCTGGGAGAT---CAGCCAGCGTAACATCGTG 6053 Query 263227 GATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGC-TCAACCTGTACCT 263285 | ||||| || ||||| | | | | |||||||| || | || | ||| | || | Sbjct 6054 CAGATGGCTGCTGACCGTGGTGCTTTTATCGACCAGTCTCA-TAGCTTGAACATCCACAT 6112 Query 263286 CGCCGACCCGAC---GGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGG 263342 || || || || | || || || |||||| | || ||| | ||| Sbjct 6113 GAAGGAGCCAACCATGGGCAAG---ATTACCAGCATGCACTTCGCTGGCTGGAAGCTCGG 6169 Query 263343 CCTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGC--CAACGCC-ATTCAATT 263399 ||||||||||||||||||||||| || || || ||||| || |||| || || || Sbjct 6170 TCTCAAGACTGGCATGTACTATCTCCGAAC---GCAAGCTGCTTCAGCGCCAATCCAGTT 6226 Query 263400 CACCGTCGATCAGGCGATG 263418 ||| ||||| |||| |||| Sbjct 6227 CACTGTCGACCAGGAGATG 6245 Score = 89.7 bits (98), Expect = 7e-12 Identities = 101/133 (76%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 262094 ATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAAG 262153 || |||| || ||| ||| ||| || | |||||||||||| || | ||| | |||||| Sbjct 5139 ATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTCTGTACAAG 5198 Query 262154 GACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAG-GCCAACCT 262212 ||||||| ||||| | ||||||||| |||| || ||||||| | |||| | || | Sbjct 5199 GACGCCGCCAACCGCAAGAGCAACCAGAAGAATCTTGGCACCATCA-AGAGCTCTAATTT 5257 Query 262213 GTGCACCGAGATC 262225 |||||| |||||| Sbjct 5258 GTGCACTGAGATC 5270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177069388913942