Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq6817 183 4e-40
seq4637 123 4e-22
seq379 98.7 1e-14
>seq6817
Length=715036
Score = 183 bits (202), Expect = 4e-40
Identities = 359/515 (70%), Gaps = 28/515 (5%)
Strand=Plus/Minus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||||||| |||||||| ||||||||||||||||| || ||||| || |||||| | || |
Sbjct 197072 GATATGGCAAATGTAC-AAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATC 197014
Query 1455835 TCGGCGCCGACACGGTCCAC---TGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCA 1455888
| | || | | ||||| ||| || | | ||||||||| || ||||
Sbjct 197013 T-GTCGAAGGATC--TCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCA 196957
Query 1455889 TCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCC 1455948
|| ||||||||||| || || |||||| ||||||||| || ||||||||| | |
Sbjct 196956 TCTCACACGTCCTCGCATTCTT-CGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTC 196898
Query 1455949 GGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008
| ||||| | ||||| || | || |||||||| | || ||||| |||||||||
Sbjct 196897 GAGCGCTTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATC 196838
Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068
|| || ||||||||||| || || || || || || ||||| || ||| ||| ||
Sbjct 196837 ATGATGGAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAG 196778
Query 1456069 CCGGTCGAGAAG-GACC--ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAA 1456125
|| || || || | |||| || |||||||||| | || | | | |
Sbjct 196777 CC---AAAGCAGCGAACATACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGG 196721
Query 1456126 AAGGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182
||||| ||||||||| || ||||| ||||| | ||||||| || ||| |
Sbjct 196720 AAGGCTGACTGGGCGTTGCGATGGATTTCTGACAAGAA----CTCGACA-TTCGCCCTCC 196666
Query 1456183 GGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATC 1456240
| ||| ||| ||||||| ||| ||||||||||| ||||| || | || ||| || |||
Sbjct 196665 GTCTCATCGCATTTGCCGCCGTTGAGGGCATCTTCTTCTCTGG-ATCTTTTGCTGCTATC 196607
Query 1456241 TTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
|| ||||| ||||| || || |||||| |||| ||
Sbjct 196606 TTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCT 196572
Score = 93.3 bits (102), Expect = 6e-13
Identities = 180/260 (69%), Gaps = 7/260 (3%)
Strand=Plus/Minus
Query 1456519 GCAGATCATCGT---CGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCC 1456575
||||| |||| | |||||||||| ||| ||| | ||||| | | || | || ||
Sbjct 196469 GCAGAGCATCATTACCGAGGCCGTCACGATTGAGCAGGAGTTCTTGACAGACGCTCTTCC 196410
Query 1456576 GGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCC 1456635
||| | || |||||||| | ||||||| || ||||||||||| ||||||
Sbjct 196409 ATGCAAGCTTCTGGGGATGAACGCTGGC-CTCATGTCACAATACATTGAATTC-GTCGCC 196352
Query 1456636 GACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCC 1456695
|| ||||| || ||| |||||| | ||||| |||| | ||||||| |||
Sbjct 196351 GATCGCCTACTGTTGGCACTCGGCAACA-AGAAGTTCTACAACGCCACCAACCCCTTCGA 196293
Query 1456696 ATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGA 1456754
| |||||| || ||||| | |||||||||||||| |||||| || | ||||||
Sbjct 196292 CTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGA 196233
Query 1456755 GTACGCCAAGGCCGGCGTCA 1456774
|||| ||||| || ||||
Sbjct 196232 GTACCAGAAGGCTGGTGTCA 196213
>seq4637
Length=70287
Score = 123 bits (136), Expect = 4e-22
Identities = 323/490 (66%), Gaps = 2/490 (0%)
Strand=Plus/Plus
Query 332847 CGATTTGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCT 332906
||| ||| | || ||||| ||| | |||| | ||| || || || || || | ||
Sbjct 64460 CGACTTGCCCATCGGTGAGTCGCGCGTAGCGTAAGATTGCGCAGCGCGATTGGAGAGGCT 64519
Query 332907 CGATGACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTT 332966
|||||| | ||| |||||| || | ||| || || ||||| || | | |||
Sbjct 64520 CGATGATTTTGTTCGATTGGTTGCAAGCGAAGGCGAAGCGGGTCGTGCTGCTGTAGATTT 64579
Query 332967 CCATGGT-CGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGG 333025
|||| || |||| | || ||||| || || | | || | || || || ||||| |
Sbjct 64580 CCATCGTTCGAC-GCAGTGCCTGCTGCGCTCCTGAAGTCATGCTATCTGCTTCGTCTAAA 64638
Query 333026 ATGATGATCTTGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATG 333085
|| | ||||| || |||||| || || ||| ||||| ||| | ||||||
Sbjct 64639 ATTACAATCTTCTGCCGCCCGGCGGGGAGTGTGACCTTTTTCTGCGCGAAGCCCTTGATG 64698
Query 333086 ATCTTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCG 333145
|| || |||||||| | ||||||||||| || |||||||||||||| ||||| ||
Sbjct 64699 CGGTTTCGTACGACGTCGATTCCGCGCTCGTCGGAGGCGTTGAGTTCGAGGACGGCTTCT 64758
Query 333146 TCGGCGGCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTG 333205
| | ||| | || || || |||||| ||||| || ||||| ||||| |
Sbjct 64759 TTGTAGGCTGGGCCTAACAGTTGGCGCGCGAGGCAGAGGACTGAGGTGGTTTTGCCGATT 64818
Query 333206 CCGGGCGGACCCGCCAGCAAGAGGTTGGGCATGTTGCCGTCGGCGGCCAGCGCCTTGAGG 333265
|||||| |||| | | | || ||||||||||| || ||| | ||||||
Sbjct 64819 CCGGGCATGCCCGAGATGATTACGTGTGGCATGTTGCCATCTTTGGCGATGATTTTGAGG 64878
Query 333266 TAGGCAACGGCGTGCTCGTTGCCGACAATGTCGTCGAGCACCATTGGGCGGTACTTTTCG 333325
| | || | ||||||||| ||||||||||| | | ||||||||||||||
Sbjct 64879 CGTTCGATGGTTTCGGTGTTGCCGACTATGTCGTCGAGGAAGACGGGGCGGTACTTTTCA 64938
Query 333326 ATCCATGGGA 333335
| || ||||
Sbjct 64939 ACCCTAGGGA 64948
>seq379
Length=54504
Score = 98.7 bits (108), Expect = 1e-14
Identities = 366/559 (65%), Gaps = 30/559 (5%)
Strand=Plus/Plus
Query 262872 CGGCCGCTGGGACTGGGACGCACTGCGGGCGTCGGTTCGAC-AGCATGGCCTGCGCAACT 262930
|| || ||||||||||| |||||| || | | ||| | |||| || |||||||||
Sbjct 5705 CGACCTCTGGGACTGGGCCGCACTCAAGG-GCAAGATCGCCCAGCACGGTGTGCGCAACT 5763
Query 262931 CGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGG 262990
|| | ||||| |||| ||||| || ||| |||| ||||||||| ||||| | ||||
Sbjct 5764 CGCTTCTCGTTGCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGT 5823
Query 262991 CGTTCGAGGTCAT-CACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACC 263049
||||| | ||| ||| |||||||| ||| | || || ||| | | ||||| ||
Sbjct 5824 GCTTCGA-GCCATACACAAGCAACATTTACTCTCGTCGTGTGTTGGCTGGCGAGTTCCAG 5882
Query 263050 GTGGTCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTT 263109
|| ||||||| || | ||| | || | || ||||||||| | || |
Sbjct 5883 GTCGTCAACCCATGGCTTCTGAAGGATCTCGTCGACCGTGGCCTGTGGTCAGAGAACATG 5942
Query 263110 CGCGACCGGCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCG 263169
|||| |||| || | | ||||| | ||| || | | || | ||
Sbjct 5943 AAGAACCGCATCATCGCTGACAATGGCTCCATTCAGCGCATCCCCAAC------ATTCCA 5996
Query 263170 CCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACC-GGGTGAC--CATT 263226
||| |||||||| |||| ||||||||| |||||| | || || | || || | |
Sbjct 5997 GACGACCTCAAGGCACTCTACAAGACCGTCTGGGAGAT---CAGCCAGCGTAACATCGTG 6053
Query 263227 GATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGC-TCAACCTGTACCT 263285
| ||||| || ||||| | | | | |||||||| || | || | ||| | || |
Sbjct 6054 CAGATGGCTGCTGACCGTGGTGCTTTTATCGACCAGTCTCA-TAGCTTGAACATCCACAT 6112
Query 263286 CGCCGACCCGAC---GGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGG 263342
|| || || || | || || || |||||| | || ||| | |||
Sbjct 6113 GAAGGAGCCAACCATGGGCAAG---ATTACCAGCATGCACTTCGCTGGCTGGAAGCTCGG 6169
Query 263343 CCTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGC--CAACGCC-ATTCAATT 263399
||||||||||||||||||||||| || || || ||||| || |||| || || ||
Sbjct 6170 TCTCAAGACTGGCATGTACTATCTCCGAAC---GCAAGCTGCTTCAGCGCCAATCCAGTT 6226
Query 263400 CACCGTCGATCAGGCGATG 263418
||| ||||| |||| ||||
Sbjct 6227 CACTGTCGACCAGGAGATG 6245
Score = 89.7 bits (98), Expect = 7e-12
Identities = 101/133 (76%), Gaps = 2/133 (2%)
Strand=Plus/Plus
Query 262094 ATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAAG 262153
|| |||| || ||| ||| ||| || | |||||||||||| || | ||| | ||||||
Sbjct 5139 ATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTCTGTACAAG 5198
Query 262154 GACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAG-GCCAACCT 262212
||||||| ||||| | ||||||||| |||| || ||||||| | |||| | || |
Sbjct 5199 GACGCCGCCAACCGCAAGAGCAACCAGAAGAATCTTGGCACCATCA-AGAGCTCTAATTT 5257
Query 262213 GTGCACCGAGATC 262225
|||||| ||||||
Sbjct 5258 GTGCACTGAGATC 5270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177069388913942
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |