Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_026926.1
Length=192108
Score E
Sequences producing significant alignments: (Bits) Value
seq2141 109 7e-19
>seq2141
Length=3127
Score = 109 bits (120), Expect = 7e-19
Identities = 170/240 (71%), Gaps = 15/240 (6%)
Strand=Plus/Minus
Query 158074 TATGACTCAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTTGGTTC 158133
|| || ||| |||||||||||| ||||||| ||| ||| ||| ||| |||| |||||
Sbjct 1516 TACGAGTCATTAGCTCAGTTGG-TAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTC 1458
Query 158134 GAGTCCAACCTGAGTCGCCAGT-----CG-GTATGGCGGAATTGGTAGACGCGCCAGGTT 158187
||| || | ||| || ||| || || |||||||||||| |||||| | || |
Sbjct 1457 GAGCCCTTCATGACTCACCATCATATGCGCGTGTGGCGGAATTGGCAGACGCACTAGACT 1398
Query 158188 TAGGTTCTGGTGTCTTATGACGTGGAGGTTCAAGTCCTCTTACCGACACTCGCTCGAA-- 158245
|||| ||| | ||||| |||||||| ||||||||||| || || | | ||
Sbjct 1397 TAGGATCTAGCGTCTT-TGACGTGGGGGTTCAAGTCCCTCCACGCGCATCCTTTATAAGC 1339
Query 158246 -----TAGCTCAGAGGTAGAGCACCTCCTTTACACGGAGATTGTCGGGGGTTCGATCCCC 158300
| |||||| ||||||||| | |||| || || || |||| ||||||||| |||
Sbjct 1338 GGACGTGGCTCAGCGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCGATTCCC 1279
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 614558512200480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |