Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_026928.1 Length=189418 Score E Sequences producing significant alignments: (Bits) Value seq2141 107 2e-18 seq4291 82.4 9e-11 >seq2141 Length=3127 Score = 107 bits (118), Expect = 2e-18 Identities = 168/237 (71%), Gaps = 15/237 (6%) Strand=Plus/Minus Query 154258 GACTCAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTTGGTTCGAG 154317 || ||| |||||||||||| ||||||| ||| ||| ||| ||| |||| |||||||| Sbjct 1513 GAGTCATTAGCTCAGTTGG-TAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGAG 1455 Query 154318 TCCAACCTGAGTCGCCAGT-----CG-GTATGGCGGAATTGGTAGACGCGCCAGGTTTAG 154371 || | ||| || ||| || || |||||||||||| |||||| | || |||| Sbjct 1454 CCCTTCATGACTCACCATCATATGCGCGTGTGGCGGAATTGGCAGACGCACTAGACTTAG 1395 Query 154372 GTTCTGGTGTCTTATGACGTGGAGGTTCAAGTCCTCTTACCGACACTCGCTCGAA----- 154426 | ||| | ||||| |||||||| ||||||||||| || || | | || Sbjct 1394 GATCTAGCGTCTT-TGACGTGGGGGTTCAAGTCCCTCCACGCGCATCCTTTATAAGCGGA 1336 Query 154427 --TAGCTCAGAGGTAGAGCACCTCCTTTACACGGAGATTGTCGGGGGTTCGATCCCC 154481 | |||||| ||||||||| | |||| || || || |||| ||||||||| ||| Sbjct 1335 CGTGGCTCAGCGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCGATTCCC 1279 >seq4291 Length=1415 Score = 82.4 bits (90), Expect = 9e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 154255 CATGACTCAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTTGGTTC 154314 |||| ||||||||||||| ||||||||||||| ||||||||| |||||||| ||||| Sbjct 587 CATGTCTCAGTAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTCGGTCGGGGGTTC 528 Query 154315 GAGTCCAACCTGAGTCGCCA 154334 || ||| |||| | || || Sbjct 527 GAATCCCTCCTGGGACGTCA 508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605951339752080