Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_026928.1
Length=189418
Score E
Sequences producing significant alignments: (Bits) Value
seq2141 107 2e-18
seq4291 82.4 9e-11
>seq2141
Length=3127
Score = 107 bits (118), Expect = 2e-18
Identities = 168/237 (71%), Gaps = 15/237 (6%)
Strand=Plus/Minus
Query 154258 GACTCAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTTGGTTCGAG 154317
|| ||| |||||||||||| ||||||| ||| ||| ||| ||| |||| ||||||||
Sbjct 1513 GAGTCATTAGCTCAGTTGG-TAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGAG 1455
Query 154318 TCCAACCTGAGTCGCCAGT-----CG-GTATGGCGGAATTGGTAGACGCGCCAGGTTTAG 154371
|| | ||| || ||| || || |||||||||||| |||||| | || ||||
Sbjct 1454 CCCTTCATGACTCACCATCATATGCGCGTGTGGCGGAATTGGCAGACGCACTAGACTTAG 1395
Query 154372 GTTCTGGTGTCTTATGACGTGGAGGTTCAAGTCCTCTTACCGACACTCGCTCGAA----- 154426
| ||| | ||||| |||||||| ||||||||||| || || | | ||
Sbjct 1394 GATCTAGCGTCTT-TGACGTGGGGGTTCAAGTCCCTCCACGCGCATCCTTTATAAGCGGA 1336
Query 154427 --TAGCTCAGAGGTAGAGCACCTCCTTTACACGGAGATTGTCGGGGGTTCGATCCCC 154481
| |||||| ||||||||| | |||| || || || |||| ||||||||| |||
Sbjct 1335 CGTGGCTCAGCGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCGATTCCC 1279
>seq4291
Length=1415
Score = 82.4 bits (90), Expect = 9e-11
Identities = 66/80 (83%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 154255 CATGACTCAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTTGGTTC 154314
|||| ||||||||||||| ||||||||||||| ||||||||| |||||||| |||||
Sbjct 587 CATGTCTCAGTAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTCGGTCGGGGGTTC 528
Query 154315 GAGTCCAACCTGAGTCGCCA 154334
|| ||| |||| | || ||
Sbjct 527 GAATCCCTCCTGGGACGTCA 508
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 605951339752080
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |