Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_027132.1
Length=190768
Score E
Sequences producing significant alignments: (Bits) Value
seq2141 98.7 1e-15
>seq2141
Length=3127
Score = 98.7 bits (108), Expect = 1e-15
Identities = 165/236 (70%), Gaps = 16/236 (7%)
Strand=Plus/Minus
Query 153175 GTCAGTAGCTCAGATGGATAGAGCAATTCACTTCTAATGAATTGGTCGGGGGTTCGAGTC 153234
|||| |||||||| ||| ||||||| | |||| |||| | |||| |||||||| |
Sbjct 1511 GTCATTAGCTCAGTTGG-TAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGAGCC 1453
Query 153235 CCTCCTGACCCGCCAGT-----CG-GTATGGCGGAATTGGTAGACGCGCCAGGTTTAGGT 153288
| || |||| | ||| || || |||||||||||| |||||| | || |||||
Sbjct 1452 CTTCATGACTCACCATCATATGCGCGTGTGGCGGAATTGGCAGACGCACTAGACTTAGGA 1393
Query 153289 TCTGGTGTCTTTATGACGTGGAGGTTCAAGTCCTCTTACCGACACTCGCTCGAA------ 153342
||| | ||||| |||||||| ||||||||||| || || | | ||
Sbjct 1392 TCTAGCGTCTT--TGACGTGGGGGTTCAAGTCCCTCCACGCGCATCCTTTATAAGCGGAC 1335
Query 153343 -TAGCTCAGAGGTAGAGCAGCACCTTTACACGGTGAATGTCGGGGGTTCGATCCCC 153397
| |||||| ||||||||| | |||| || || || |||| ||||||||| |||
Sbjct 1334 GTGGCTCAGCGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCGATTCCC 1279
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 610270924438080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |