Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq379 284 1e-71
seq6817 111 2e-19
seq2482 93.3 5e-14
seq5890 86.0 7e-12
>seq379
Length=54504
Score = 284 bits (314), Expect = 1e-71
Identities = 910/1389 (66%), Gaps = 41/1389 (3%)
Strand=Plus/Plus
Query 104231 ATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACA 104290
||| ||||||| ||||| |||| ||||| |||||||||||||| | | | ||||||
Sbjct 4482 ATGATCATGCGTGTGGCTGTCGGCATTCACGGGGAAGACATTGAAGCAGCGATCGAGACA 4541
Query 104291 TACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 104349
||| || | ||||| | ||| |||| || || | ||||| || |||| ||||||
Sbjct 4542 TACAACTACATGTCGTTGAAGTAC-TTCACACATGCTTCGCCAACACTTTTCAGTGCTGG 4600
Query 104350 TACACCA-AGACCC--CAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAAT 104406
||| ||| || | | | | ||| |||||| | | |||| ||||| ||| ||
Sbjct 4601 TACCCCACAGGCGCAGCTAGCATCC---TGCTTCTTGGTGGCCATGAAGGATGACAGCAT 4657
Query 104407 CAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTAT 104466
| |||||||| | || || | | ||||| ||||| ||| ||||| |||||
Sbjct 4658 TGATGGTATCTACGACACCCTCAAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTAT 4717
Query 104467 TGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGACAAATGGT 104524
||| | || | || | | || || | | ||| || || | || ||||| ||
Sbjct 4718 TGGTCTTCATGTTCACAACATCAGGGCTAC--AGGCTCATACATTGGCGGCACAAACGGC 4775
Query 104525 CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAAT 104584
||| | ||| || | |||||||| || || | ||| ||| || || || || |
Sbjct 4776 ACATCCAACGGTCTTGTACCAATGCTACGAGTCTACAACAACACTGCACGTTACGTTGAC 4835
Query 104585 CAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCG 104638
|| | ||| ||||| | || || | || |||| |||||||| ||||||||
Sbjct 4836 CAGGGTGGCAACAAGCGTCCA---GGTGCTTTTGCCATCTACCTTGAGCCGTGGCACGCA 4892
Query 104639 GATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CG 104697
|| ||||| ||||| | || | || ||||| || | || || | || ||| ||
Sbjct 4893 GACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCG-TGCGCG 4951
Query 104698 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 104757
|||| | |||| ||||||||||||||| |||||||| ||| || | || || ||| ||
Sbjct 4952 CGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACAGAACGG 5011
Query 104758 CAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGG 104816
|| |||| |||| | || || || || || |||||||| || |||| | ||||| |
Sbjct 5012 CACTTGGACTCTAATGTGCCCCAACGAATGC-CCTGGTCTGTCGGATGTCTACGGTGACG 5070
Query 104817 AGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAG 104876
|||| | | || ||| || ||| |||||| || || |||||| | |
Sbjct 5071 AGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGACGGTTCGTG 5130
Query 104877 CTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGC 104936
|| | | ||| | ||||||||| || | || |||||||| || ||||| | ||| |
Sbjct 5131 CTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTC 5190
Query 104937 TTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTT 104996
| ||||| |||||| |||| ||||| || || |||||| | || |||||||| |
Sbjct 5191 TGTACAAGGACGCCGCCAACCGCAAGAGCAACCAGAAGAATCTTGGCACCATCAAGAGCT 5250
Query 104997 CCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACC 105056
| ||| | || || || ||| |||| | | | |||||| ||||| || || |
Sbjct 5251 CTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCGGATGAGGTCGCTGTCTGCAATC 5310
Query 105057 TCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAA 105116
| || || | ||||| |||| || || || |||| || ||||| | | |
Sbjct 5311 TGGCTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGTTTTTGACTTCAAGA 5370
Query 105117 AACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATT 105176
|||| ||||| || || ||| ||||| ||||| |||| || || | || |
Sbjct 5371 AACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGACCATCGAGATCAACT 5430
Query 105177 TTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 105235
||||| || ||| || || || || | | ||||| || |||||||| |||
Sbjct 5431 ACTACCCGGTACCAGA-GGCACGAAAGAGCAACTTCCGCCACCGACCCATTGGTCTTGGT 5489
Query 105236 GTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTCCGACGAAGC 105294
|| | ||||| || |||| ||| || | || || | |||| || || || ||
Sbjct 5490 GTCAACGGTCTTGCTGATGCCTTC-TTGGCTCTCCGCATGCCATTCGACTCGCCTGAGGC 5548
Query 105295 GAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTC 105354
||||| |||| | || ||||||||||| ||||| || ||||||||||| |||
Sbjct 5549 CAAGGAGCTCAACATCCAGATTTTTGAGACCATCTATCATGCTGCTCTTGAGGC---TTC 5605
Query 105355 A---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACA 105411
| ||| | || ||| ||||| || || || | || ||||||| || ||
Sbjct 5606 ATGCGAGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTCCAGTATCGCA 5665
Query 105412 AGGGGTGCTTCAATTTGATATGTGGG--AAG-GTGAGACCAAGCTTCACTACGACTGGGA 105468
|| | ||| || | || ||||||| ||| | ||| | || || |||||||
Sbjct 5666 GGGCGAGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCT---CTGGGACTGGGC 5722
Query 105469 AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAAT 105528
|| ||||||| ||| || | ||| | || ||| || ||| | || || ||
Sbjct 5723 CGCACTCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTCTCGTTGCGCCGAT 5782
Query 105529 GCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGAC 105588
|||||||||||| ||| | || ||| |||| ||| || ||||| || || ||||| |
Sbjct 5783 GCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCTTCGAGCCATACACAAG 5842
Query 105589 GAACATCTA 105597
||||| ||
Sbjct 5843 CAACATTTA 5851
>seq6817
Length=715036
Score = 111 bits (122), Expect = 2e-19
Identities = 116/150 (77%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 94807 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTAT 94865
|| ||| |||||||||| |||||||| |||||||||||||| | ||| ||| |||||
Sbjct 196666 CGTCTCATCGCATTTGCCGCCGTTGAGGGCATCTTCTTCTCTGGAT-CTTTTGCTGCTAT 196608
Query 94866 TTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTC 94925
| ||||| ||||| || ||||||||| | || ||| ||||| |||||||| |||||
Sbjct 196607 CTTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTC 196548
Query 94926 TCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
||||| ||||| | ||| ||| || ||
Sbjct 196547 CCGTGATGAGGGCATGCACACAGACTTCGC 196518
>seq2482
Length=248254
Score = 93.3 bits (102), Expect = 5e-14
Identities = 148/206 (72%), Gaps = 6/206 (3%)
Strand=Plus/Minus
Query 169169 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 169228
|||||||||||||| || || |||| ||| ||| ||||||||||| ||| | |||||
Sbjct 17824 AGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGTCATGATCATCAGATGGCCATAA 17765
Query 169229 CG-AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGA- 169286
|| |||| | | |||| |||||||| ||||| ||||||| | ||||||||
Sbjct 17764 CGCAAGC-CTTTAGTATCTGTGTAGTCCTTCTTATGTTGCAGACCCAGAAACTTCTTGAT 17706
Query 169287 GATCGTTGAA-CTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACATTCTTA 169345
| || |||| ||| ||| || | ||| || || |||||||| ||||| |
Sbjct 17705 GTTC--TGAATCTCGGCGTTCCTTGAAATCTGGTCGATGGAAGCATCGCGCACATTGAGA 17648
Query 169346 CACTTCCCACGAAGAGGGAAGACACC 169371
||| |||||||| |||||||||||
Sbjct 17647 ATCTTACCACGAAGTGGGAAGACACC 17622
>seq5890
Length=2317
Score = 86.0 bits (94), Expect = 7e-12
Identities = 241/369 (65%), Gaps = 6/369 (2%)
Strand=Plus/Plus
Query 9523 ACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGC 9582
||| ||||| || |||||||| || | || || || || || | || ||||| ||
Sbjct 1210 ACGGTCAAAACGTCCTGGACGCAGCAAGGCAGGGTCCAGAATGTCTGCACGGTTCGTAGC 1269
Query 9583 GGCGATGACAACAATACCTGTTTCATTATCA---AAACCATCCATCTCTGTCAAAAGTTG 9639
|| | || | ||||||| ||||| | ||||||||||| || | | ||
Sbjct 1270 TGCAACGATGATAATACCT---TCATTGGCTCCGAAACCATCCATTTCAACGAGCAACTG 1326
Query 9640 GTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCC 9699
||| | |||||||| ||||| || | | | |||||||| || || |||
Sbjct 1327 GTTGAGTGTTTGTTCACGTTCGTCGTGACCACCACCAAGACCAGCACCACGCTGACGTCC 1386
Query 9700 CACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAA 9759
|| |||||||| ||||| || |||| ||| ||||| |||| || ||||||
Sbjct 1387 TACCGCATCAATTTCATCGATAAAGATGATACATGGGGCGTTTTTCTTCGCATTTTCAAA 1446
Query 9760 GAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA 9819
| || |||||||| || || ||||| |||||||| || || |||| | ||||
Sbjct 1447 CAAGTCACGTACACGAGATGCACCGACACCGACAAACATTTCAACGAAGTCAGAACCGGA 1506
Query 9820 ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACC 9879
| || ||| || ||| | ||||| |||| || || ||||| | || |||||
Sbjct 1507 AATGCTGAAGAATGGTACACCCGCCTCACCGGCAACAGCACGAGCGAGCAAGGTTTTACC 1566
Query 9880 CGTACCTGG 9888
||||| ||
Sbjct 1567 TGTACCCGG 1575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583204726764840
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