Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq379 284 1e-71 seq6817 111 2e-19 seq2482 93.3 5e-14 seq5890 86.0 7e-12 >seq379 Length=54504 Score = 284 bits (314), Expect = 1e-71 Identities = 910/1389 (66%), Gaps = 41/1389 (3%) Strand=Plus/Plus Query 104231 ATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACA 104290 ||| ||||||| ||||| |||| ||||| |||||||||||||| | | | |||||| Sbjct 4482 ATGATCATGCGTGTGGCTGTCGGCATTCACGGGGAAGACATTGAAGCAGCGATCGAGACA 4541 Query 104291 TACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 104349 ||| || | ||||| | ||| |||| || || | ||||| || |||| |||||| Sbjct 4542 TACAACTACATGTCGTTGAAGTAC-TTCACACATGCTTCGCCAACACTTTTCAGTGCTGG 4600 Query 104350 TACACCA-AGACCC--CAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAAT 104406 ||| ||| || | | | | ||| |||||| | | |||| ||||| ||| || Sbjct 4601 TACCCCACAGGCGCAGCTAGCATCC---TGCTTCTTGGTGGCCATGAAGGATGACAGCAT 4657 Query 104407 CAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTAT 104466 | |||||||| | || || | | ||||| ||||| ||| ||||| ||||| Sbjct 4658 TGATGGTATCTACGACACCCTCAAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTAT 4717 Query 104467 TGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGACAAATGGT 104524 ||| | || | || | | || || | | ||| || || | || ||||| || Sbjct 4718 TGGTCTTCATGTTCACAACATCAGGGCTAC--AGGCTCATACATTGGCGGCACAAACGGC 4775 Query 104525 CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAAT 104584 ||| | ||| || | |||||||| || || | ||| ||| || || || || | Sbjct 4776 ACATCCAACGGTCTTGTACCAATGCTACGAGTCTACAACAACACTGCACGTTACGTTGAC 4835 Query 104585 CAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCG 104638 || | ||| ||||| | || || | || |||| |||||||| |||||||| Sbjct 4836 CAGGGTGGCAACAAGCGTCCA---GGTGCTTTTGCCATCTACCTTGAGCCGTGGCACGCA 4892 Query 104639 GATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CG 104697 || ||||| ||||| | || | || ||||| || | || || | || ||| || Sbjct 4893 GACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCG-TGCGCG 4951 Query 104698 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 104757 |||| | |||| ||||||||||||||| |||||||| ||| || | || || ||| || Sbjct 4952 CGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACAGAACGG 5011 Query 104758 CAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGG 104816 || |||| |||| | || || || || || |||||||| || |||| | ||||| | Sbjct 5012 CACTTGGACTCTAATGTGCCCCAACGAATGC-CCTGGTCTGTCGGATGTCTACGGTGACG 5070 Query 104817 AGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAG 104876 |||| | | || ||| || ||| |||||| || || |||||| | | Sbjct 5071 AGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGACGGTTCGTG 5130 Query 104877 CTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGC 104936 || | | ||| | ||||||||| || | || |||||||| || ||||| | ||| | Sbjct 5131 CTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTC 5190 Query 104937 TTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTT 104996 | ||||| |||||| |||| ||||| || || |||||| | || |||||||| | Sbjct 5191 TGTACAAGGACGCCGCCAACCGCAAGAGCAACCAGAAGAATCTTGGCACCATCAAGAGCT 5250 Query 104997 CCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACC 105056 | ||| | || || || ||| |||| | | | |||||| ||||| || || | Sbjct 5251 CTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCGGATGAGGTCGCTGTCTGCAATC 5310 Query 105057 TCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAA 105116 | || || | ||||| |||| || || || |||| || ||||| | | | Sbjct 5311 TGGCTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGTTTTTGACTTCAAGA 5370 Query 105117 AACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATT 105176 |||| ||||| || || ||| ||||| ||||| |||| || || | || | Sbjct 5371 AACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGACCATCGAGATCAACT 5430 Query 105177 TTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 105235 ||||| || ||| || || || || | | ||||| || |||||||| ||| Sbjct 5431 ACTACCCGGTACCAGA-GGCACGAAAGAGCAACTTCCGCCACCGACCCATTGGTCTTGGT 5489 Query 105236 GTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTCCGACGAAGC 105294 || | ||||| || |||| ||| || | || || | |||| || || || || Sbjct 5490 GTCAACGGTCTTGCTGATGCCTTC-TTGGCTCTCCGCATGCCATTCGACTCGCCTGAGGC 5548 Query 105295 GAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTC 105354 ||||| |||| | || ||||||||||| ||||| || ||||||||||| ||| Sbjct 5549 CAAGGAGCTCAACATCCAGATTTTTGAGACCATCTATCATGCTGCTCTTGAGGC---TTC 5605 Query 105355 A---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACA 105411 | ||| | || ||| ||||| || || || | || ||||||| || || Sbjct 5606 ATGCGAGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTCCAGTATCGCA 5665 Query 105412 AGGGGTGCTTCAATTTGATATGTGGG--AAG-GTGAGACCAAGCTTCACTACGACTGGGA 105468 || | ||| || | || ||||||| ||| | ||| | || || ||||||| Sbjct 5666 GGGCGAGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCT---CTGGGACTGGGC 5722 Query 105469 AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAAT 105528 || ||||||| ||| || | ||| | || ||| || ||| | || || || Sbjct 5723 CGCACTCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTCTCGTTGCGCCGAT 5782 Query 105529 GCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGAC 105588 |||||||||||| ||| | || ||| |||| ||| || ||||| || || ||||| | Sbjct 5783 GCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCTTCGAGCCATACACAAG 5842 Query 105589 GAACATCTA 105597 ||||| || Sbjct 5843 CAACATTTA 5851 >seq6817 Length=715036 Score = 111 bits (122), Expect = 2e-19 Identities = 116/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 94807 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTAT 94865 || ||| |||||||||| |||||||| |||||||||||||| | ||| ||| ||||| Sbjct 196666 CGTCTCATCGCATTTGCCGCCGTTGAGGGCATCTTCTTCTCTGGAT-CTTTTGCTGCTAT 196608 Query 94866 TTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTC 94925 | ||||| ||||| || ||||||||| | || ||| ||||| |||||||| ||||| Sbjct 196607 CTTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTC 196548 Query 94926 TCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||| ||||| | ||| ||| || || Sbjct 196547 CCGTGATGAGGGCATGCACACAGACTTCGC 196518 >seq2482 Length=248254 Score = 93.3 bits (102), Expect = 5e-14 Identities = 148/206 (72%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 169169 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 169228 |||||||||||||| || || |||| ||| ||| ||||||||||| ||| | ||||| Sbjct 17824 AGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGTCATGATCATCAGATGGCCATAA 17765 Query 169229 CG-AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGA- 169286 || |||| | | |||| |||||||| ||||| ||||||| | |||||||| Sbjct 17764 CGCAAGC-CTTTAGTATCTGTGTAGTCCTTCTTATGTTGCAGACCCAGAAACTTCTTGAT 17706 Query 169287 GATCGTTGAA-CTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACATTCTTA 169345 | || |||| ||| ||| || | ||| || || |||||||| ||||| | Sbjct 17705 GTTC--TGAATCTCGGCGTTCCTTGAAATCTGGTCGATGGAAGCATCGCGCACATTGAGA 17648 Query 169346 CACTTCCCACGAAGAGGGAAGACACC 169371 ||| |||||||| ||||||||||| Sbjct 17647 ATCTTACCACGAAGTGGGAAGACACC 17622 >seq5890 Length=2317 Score = 86.0 bits (94), Expect = 7e-12 Identities = 241/369 (65%), Gaps = 6/369 (2%) Strand=Plus/Plus Query 9523 ACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGC 9582 ||| ||||| || |||||||| || | || || || || || | || ||||| || Sbjct 1210 ACGGTCAAAACGTCCTGGACGCAGCAAGGCAGGGTCCAGAATGTCTGCACGGTTCGTAGC 1269 Query 9583 GGCGATGACAACAATACCTGTTTCATTATCA---AAACCATCCATCTCTGTCAAAAGTTG 9639 || | || | ||||||| ||||| | ||||||||||| || | | || Sbjct 1270 TGCAACGATGATAATACCT---TCATTGGCTCCGAAACCATCCATTTCAACGAGCAACTG 1326 Query 9640 GTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCC 9699 ||| | |||||||| ||||| || | | | |||||||| || || ||| Sbjct 1327 GTTGAGTGTTTGTTCACGTTCGTCGTGACCACCACCAAGACCAGCACCACGCTGACGTCC 1386 Query 9700 CACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAA 9759 || |||||||| ||||| || |||| ||| ||||| |||| || |||||| Sbjct 1387 TACCGCATCAATTTCATCGATAAAGATGATACATGGGGCGTTTTTCTTCGCATTTTCAAA 1446 Query 9760 GAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA 9819 | || |||||||| || || ||||| |||||||| || || |||| | |||| Sbjct 1447 CAAGTCACGTACACGAGATGCACCGACACCGACAAACATTTCAACGAAGTCAGAACCGGA 1506 Query 9820 ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACC 9879 | || ||| || ||| | ||||| |||| || || ||||| | || ||||| Sbjct 1507 AATGCTGAAGAATGGTACACCCGCCTCACCGGCAACAGCACGAGCGAGCAAGGTTTTACC 1566 Query 9880 CGTACCTGG 9888 ||||| || Sbjct 1567 TGTACCCGG 1575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583204726764840