Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq2313 145 2e-29 seq1909 122 3e-22 seq260 109 2e-18 seq7284 107 6e-18 >seq2313 Length=213737 Score = 145 bits (160), Expect = 2e-29 Identities = 469/726 (65%), Gaps = 3/726 (0%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || ||||| || ||||| || || ||||| || | | | | | ||||||| Sbjct 94621 GCAATTGGTATCGACTTGGGTACCACGTACTCTTGCGTGGGTATCTTCAGAGATGATCGC 94680 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 | || || || || || ||||| || ||| | ||||| || |||| ||| || || || Sbjct 94681 ATTGAGATCATCGCCAACGATCAGGGCAACCGCACAACACCCTCATTCGTCGCCTTCACA 94740 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| |||| |||||| | || || || || | || || ||| ||| Sbjct 94741 GACACCGAGCGTCTGATCGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCAGCAAAC 94800 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438 || || || || || |||||| | || || | | || ||| | ||| | Sbjct 94801 ACAGTCTTCGACGCAAAGCGATTGATCGGCCGCAAGTTCCAAGACGCAGAGGTGCAAGCA 94860 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498 || | || || || || || | || | | | ||| | || || ||| | || | Sbjct 94861 GACATGAAGCACTTCCCCTTCAAGGTCAT-CGAGAAGGC--TGGCAAGCCAGTCATCTCG 94917 Query 349499 GTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTA 349558 || || | || || || | || || || ||| || || || || | ||| | | Sbjct 94918 GTCGAGTTCAAGGGCGAGGAGAAGCAGTTCACACCAGAGGAGATCTCCGCCATGATCCTC 94977 Query 349559 GTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATT 349618 || ||| || | || || | || | |||| || || | | || || | Sbjct 94978 ACAAAGATGCGTGAGACCGCAGAGTCGTACCTTGGTGGCACCGTCAACAACGCCGTCGTC 95037 Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678 || || ||||| ||||| || || | ||||| |||||||| || || || |||| Sbjct 95038 ACGGTTCCAGCATATTTCAACGACTCGCAGCGACAAGCAACAAAGGACGCCGGTCTCATT 95097 Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738 || || | || || || | || || ||||| || ||||| ||||| ||||| || || Sbjct 95098 GCTGGCCTCAACGTCCTCCGTATCATCAATGAGCCAACTGCAGCAGCCATTGCCTACGGT 95157 Query 349739 CTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACT 349798 || || || | || ||| || ||| | || || || ||| | ||||||||||| Sbjct 95158 CTCGACAAGAAGACTGAGGGCGAGCGCAATGTGCTCATCTTCGATCTTGGTGGTGGTACC 95217 Query 349799 TTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGT 349858 || ||||| || || || ||| | || ||||| ||||| || || || | ||||||||| Sbjct 95218 TTCGATGTGTCGCTGCTCACAATCGAGGAGGGTATTTTCGAGGTCAAGTCCACTGCTGGT 95277 Query 349859 GATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAA 349918 || || || | ||||| || || || || || || || || || || || || ||| Sbjct 95278 GACACTCACTTGGGTGGTGAGGACTTCGACAACCGCCTTGTCAACCACTTCGTAAACGAA 95337 Query 349919 TTTAAG 349924 |||||| Sbjct 95338 TTTAAG 95343 >seq1909 Length=2575 Score = 122 bits (134), Expect = 3e-22 Identities = 214/312 (69%), Gaps = 6/312 (2%) Strand=Plus/Minus Query 349576 TGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTT 349635 ||||||||||||| | ||| |||| |||||| | || ||||| || |||||||| || || Sbjct 597 TGCTGAAGCATATCTGGGTCAAACGGTAACTCAAGCAGTTATCACGGTACCAGCTTACTT 538 Query 349636 TAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCT 349695 ||||| ||||||| ||||| |||||||| || | || || || | | ||||| Sbjct 537 CAATGACAGCCAGCGTCAAGCAACCAAAGATGCAGGTAAAATCGCAGGTCTGGAAGTTCT 478 Query 349696 AAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGA 349755 | || | || || || || || ||||| | ||||| || | || ||| Sbjct 477 GCGTATCGTCAACGAGCCAACAGCAGCAGCTTTGGCATACGGTATGGAGAAA------TC 424 Query 349756 CCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACT 349815 | |||| ||| ||||| | | ||| || ||||| ||||| || || ||||| | || Sbjct 423 CGAAGACCAAACGATTCTCGTATATGACTTGGGTGGCGGTACATTCGACGTATCCATCCT 364 Query 349816 AACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGG 349875 ||| | || || | || ||||||||||| || ||||||| || || ||||| Sbjct 363 TGAACTGGGTGACGGCTTCTTCGAAGTTAAAGCGACCAGCGGTGATAACCAACTGGGTGG 304 Query 349876 AGAAGATTTTGA 349887 || || ||||| Sbjct 303 CGATGACTTTGA 292 >seq260 Length=339642 Score = 109 bits (120), Expect = 2e-18 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || ||||| ||||| ||| || || || || || || Sbjct 135838 CATACCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTC 135897 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || || || || || || || || | |||||||| ||||| Sbjct 135898 GGACAGGGTGCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGG 135957 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 ||||| ||||| |||||||| || || ||| || |||||||| || | || || | | Sbjct 135958 TGGAATGCCTTCCTTATCCTGGATCTT-GCTCTTCACATTATCGATGGTGTCGGACGACT 136016 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGT 140719 |||| || || |||| ||||| ||||| | ||| Sbjct 136017 CAACCTCGAGGGTAATGGTCTTGCCGGTGACTGT 136050 Score = 104 bits (114), Expect = 7e-17 Identities = 166/236 (70%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || | || ||||| || ||||| || || || | Sbjct 135606 TTTGCATACCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGT 135665 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || ||||| || || || || || ||||| || || || ||||| | Sbjct 135666 AGTCGGACAGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGT 135725 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| || || || || || ||||| || || | || ||||| || || | || | || Sbjct 135726 CAGGTGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTC-GCTG 135784 Query 140683 G-TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || || || | ||||| ||||| || || || || || |||||||| Sbjct 135785 GACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 135840 >seq7284 Length=231214 Score = 107 bits (118), Expect = 6e-18 Identities = 245/368 (67%), Gaps = 3/368 (1%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 || ||||| | ||||| ||| | | | || ||||||||| | || || |||| | Sbjct 39228 CCAGAAGAGGTCTCATCCATGATCCTGGGCAAGATGAAGGAAGTCGCCGAGTCATACCTC 39169 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || |||| || || | || || | || || |||||||| || || || ||||||||| Sbjct 39168 GGCGAAAAGGTCACCAACGCAGTCGTCACAGTCCCAGCCTACTTCAACGACGCCCAGCGT 39109 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 | || || || || ||||||| || || || | || || || | | | || ||| Sbjct 39108 GCCGCTACCAAGGACGCTGGCACGATCGCCGGTCTCAACGTCCTCCGTGTCGTCAACGAA 39049 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 || || || || || | || || || || || || || ||| | ||| | || Sbjct 39048 CCTACCGCCGCCGCTCTCGCCTACGGCCTCGACAA---GACCGACAAGGAACGCCAGATC 38992 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 || | | || | |||||||||||||| ||||| || | | || | || |||| Sbjct 38991 ATTGTCTACGACCTTGGTGGTGGTACTTTCGATGTCTCCATCTTGACTGTCGACCAGGGT 38932 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891 | || || ||| | ||||| || ||||| || ||||||||||| || ||||| || | Sbjct 38931 GTGTTCGAGGTTCAGGCAACGGCCGGTGACACCCATCTTGGTGGTGAGGATTTCGACCAG 38872 Query 349892 CGTCTCGT 349899 ||| |||| Sbjct 38871 CGTGTCGT 38864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515105085410873