Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq379 183 3e-41 seq260 176 5e-39 seq2864 132 5e-26 seq3236 98.7 1e-15 seq2482 84.2 2e-11 >seq379 Length=54504 Score = 183 bits (202), Expect = 3e-41 Identities = 800/1242 (64%), Gaps = 39/1242 (3%) Strand=Plus/Minus Query 80539 CCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTAC 80598 ||||||||||||| ||| | ||||| ||| | ||||| || | | | |||||||| Sbjct 5692 CCCCACATGTCGTACTGGAGCTCGCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAA 5633 Query 80599 GGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCA 80658 || || | ||| || ||||| || || || ||| || || ||||| ||| |||| Sbjct 5632 GGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCA 5573 Query 80659 AAGACGCCCTTGTTCA-CACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCAT 80717 || | |||| | | || | |||| || |||||| | || || | || Sbjct 5572 AAAATCTGGATGTTGAGCTCCTTG-GCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAA 5514 Query 80718 GAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG 80777 ||| | ||||| || || | || || | | || || |||||||| ||| | || Sbjct 5513 GAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTT-GCTCT 5455 Query 80778 CTCG-GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAA 80836 ||| ||||| || | ||||| |||| | |||||| ||||||||| ||||| | Sbjct 5454 TTCGTGCCTCTGGTACCGGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGA 5395 Query 80837 CAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAAT---TGGTTCCCCTTCACAA--- 80890 | || || || || |||||||||| ||||| || | |||| | | | | Sbjct 5394 CCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGTCGACGT 5335 Query 80891 ATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACT 80950 | | || || || || ||||||||||| || || ||||| || | | | | ||| Sbjct 5334 AGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCCGGAGCAGAGTACT 5275 Query 80951 CGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACT 81010 | | ||| || |||||||||||||| ||| || || || || || |||||||| || Sbjct 5274 CCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCT 5215 Query 81011 TGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGA 81070 || |||| ||||||||||| ||| | || || ||||||||| ||| | || || Sbjct 5214 TGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGA 5155 Query 81071 GGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACAT 81130 | || || | ||| || | | || ||| || ||| |||||||| | ||| Sbjct 5154 GAATAGCATACCATATTTTCTGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCAT 5095 Query 81131 ACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCG 81189 | |||| ||| || | ||||| | |||||| | || | || | ||||| ||| Sbjct 5094 AACGCTCGTACAGC-TCCTTGAACTCGTCACCGTAGACATCCGACAGACCAGGGCATTCG 5036 Query 81190 TTAGGGCACATCAGGTGCCAGTCGGTGTCGTTC---TCTACAGCCTTCATGAAAGCG-TC 81245 || |||||||| || ||| ||| ||||| || ||| || ||| |||| | || Sbjct 5035 TTGGGGCACATTAGAGTCCA---AGTGCCGTTCTGTTCGACACGCTGCAT-AAAGAGATC 4980 Query 81246 AGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGA 81304 || |||||||| ||| ||||| ||||| ||| || | || || | || ||||| Sbjct 4979 GGGAATCCAGAGAGCGTAGAACAAATCGCGCGCA-CGAACTTCTTCCTTTCCATGGTTCT 4921 Query 81305 GGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG 81364 ||| | || | || | ||||| ||| || ||||| ||||| || || | ||| | | Sbjct 4920 TGCGAAGGTCCATGAACTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAG 4861 Query 81365 ACCCCTTGCGACG------GCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACAC 81418 | ||| |||| ||||||||||| |||||||| ||||| ||| | || | Sbjct 4860 -CACCT--GGACGCTTGTTGCCACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAGACTC 4804 Query 81419 GCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGG 81478 | | ||| || | | ||| | || ||||| || || | || || || | | Sbjct 4803 GTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTAG 4744 Query 81479 CGCGCACCTTGCTGA--TTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACA 81536 | | | ||| ||| || |||||| || || || | ||| || ||| ||||| Sbjct 4743 CCCTGATGTTG-TGAACATG-AAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACA 4686 Query 81537 CCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACA 81596 || | ||| || || || || || ||||| || | |||||| | | |||||| || Sbjct 4685 TATCTTGAGGGTGTCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCA 4626 Query 81597 GCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATG 81654 | || | || | || | | | | || ||| |||| |||||||| | || || || Sbjct 4625 GGATGCTAGCT--GCGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTG 4568 Query 81655 AAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGA 81714 || || ||||| || || || || | | | ||| || || |||||| Sbjct 4567 AAGTACTTCAACGACATGTAGTTGTATGTCTCGATCGCTGCTTCAATGTCTTCCCCGTGA 4508 Query 81715 ATACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTCG 81756 || |||| ||| |||||||| | ||| | || || ||||| Sbjct 4507 ATGCCGACAGCCACACGCATGATCATCTGTTGCGGTCTCTCG 4466 >seq260 Length=339642 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||||||||| || || || ||||| ||||| | Sbjct 135840 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 135781 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| | || || |||||||||||||| || || || |||||| Sbjct 135780 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 135721 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || |||||||| || ||||| |||||||||| |||||| || | ||||| || Sbjct 135720 CAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCCGACTACAAC 135661 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || ||||| ||||| || | || | ||||| || ||||| Sbjct 135660 ATCCAGAAAGAATCGACTCTCCACTTGGTGCTTCGTCTCCGTGGTGG 135614 Score = 145 bits (160), Expect = 9e-30 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| ||||| || ||||||||||| || | ||| | ||| ||||| Sbjct 136044 ACCGGCAAGACCATTACCCTCGAGGTTGAGTCGTCCGACACCATCGATAATGTGAAGAGC 135985 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || ||||| ||||| || ||||| || |||||||| || | ||||| || || ||| Sbjct 135984 AAGATCCAGGATAAGGAAGGCATTCCACCTGACCAGCAACGCTTGATTTTCGCAGGCAAG 135925 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || |||||||| | ||| ||||| | ||||| || |||| ||||| |||||| ||| Sbjct 135924 CAGCTCGAGGACGGTCGCACCCTGTCCGACTACAACATCCAGAAGGAGAGCACTCTCCAT 135865 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | |||||||| ||||| Sbjct 135864 CTCGTCCTCCGTCTTCGTGGTGG 135842 Score = 138 bits (152), Expect = 1e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| || |||||||||||||| || || || || || ||| Sbjct 135612 ATGCAAATTTTCGTCAAGACACTCACCGGCAAGACTATCACACTCGAAGTGGAATCATCC 135553 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | || || || ||||||||||| || || || |||||| Sbjct 135552 GACACGATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAGGGCATCCCACCGGACCAG 135493 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| || ||||| | || || || | || || || Sbjct 135492 CAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCGGATTACAAC 135433 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636 |||| ||||| |||||||| || | || ||||||| || || || ||| Sbjct 135432 ATCCAGAAGGAGTCCACTCTGCACTTGGTGCTGCGTCTCCGTGGAGGCCAA 135382 >seq2864 Length=266724 Score = 132 bits (146), Expect = 5e-26 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 27408 GCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGA 27467 ||| | ||| || ||||| || || |||||||| || || || ||||| ||||| | || Sbjct 248153 GCACAGCTTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAGGTCGAGTCGAGCGA 248094 Query 27468 TAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCA 27527 | ||| | ||| | ||| || || ||||||||||||||||| || || |||||||| Sbjct 248093 CACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCA 248034 Query 27528 GCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGT 27587 |||| | || || ||||| ||||| | ||||||| ||| ||||| | |||||||| | Sbjct 248033 GCGTTTGATCTTCGCTGGAAAGCAGTTGGAGGATGGTCGCACCCTCTCCGACTATAACAT 247974 Query 27588 CCAAAAGG 27595 ||| |||| Sbjct 247973 CCAGAAGG 247966 >seq3236 Length=283868 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||||||||| || ||||||||||| | || || || || ||||| |||||| Sbjct 201444 GACAAGGAGGGAATTCCACCGGACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAG 201503 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||| || ||||| | ||||| || | || ||||| ||| || || || ||| | Sbjct 201504 GATGGCCGCACCCTCTCCGACTACAACATTCAGAAGGAGAGCACCCTCCACCTCGTCCTC 201563 Query 27619 CGTCTTCGCGGTGG 27632 ||||| || ||||| Sbjct 201564 CGTCTGCGTGGTGG 201577 >seq2482 Length=248254 Score = 84.2 bits (92), Expect = 2e-11 Identities = 204/305 (67%), Gaps = 8/305 (3%) Strand=Plus/Plus Query 32102 ACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAA 32161 |||| ||| | || || ||| ||||| || || ||||||||||| || ||| | | Sbjct 18430 ACGGTGAGACATCACTGCAGCAAACCATCATCGGTCTGGCTCAGAACTTCGTGGGTTCCA 18489 Query 32162 ATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGG 32221 | ||| |||| | |||||||| ||| | ||||| | || || || ||||| | Sbjct 18490 ACAACATGAATATCCTCGAGCCGAGTGGCAATTTTGGATCACGTCTGCAAGGCGGCAACG 18549 Query 32222 ATGCTGCGAGCTCCCGTTACATCTTCAC----CCGTCTCGCACCTTCGACGCGCAAGATT 32277 |||| || || | |||||||| | ||| | ||||| ||| | ||| | || ||| Sbjct 18550 ATGCGGCCAGTCCTCGTTACATATACACGAGACTGTCTC-CACTTGCGA-GGGC--GATC 18605 Query 32278 TTCGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAG 32337 || | | | || || ||| |||| | |||||| || ||||| || |||| Sbjct 18606 TTTCATCAGAGCGATGAAGCGCTGCTGACGTACAACACCGACGACGGCAAGACCATCGAA 18665 Query 32338 CCGGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGA 32397 |||| | | || ||| | | ||||||||| || | ||||| || || ||||||||| Sbjct 18666 CCGGAGATGTATGTTCCAATCTTGCCGATGATCCTGATCAACGGCGCTGATGGCATCGGA 18725 Query 32398 ACGGG 32402 || || Sbjct 18726 ACCGG 18730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570255571783920