Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_028749.1 Length=134270 Score E Sequences producing significant alignments: (Bits) Value seq4937 149 5e-31 >seq4937 Length=774 Score = 149 bits (164), Expect = 5e-31 Identities = 251/359 (70%), Gaps = 6/359 (2%) Strand=Plus/Plus Query 96678 TAAATTTCTTGTCCAAGCAAACCACCAAATAGTCCATGCACACTTTCATCACGAATGATT 96737 || ||||| || | | || ||| || ||| ||||| | ||||||||| || | || Sbjct 165 TATATTTCCTGGGCCAACACACCCACATATACACCATGAATACTTTCATCCCGCAGAATC 224 Query 96738 AAGTTAATAATTTCACCACTTGCAACC-ATCTTCCCTTGACCAGCCAAATACAGAGGGTA 96796 | | ||| || |||||||| ||| | || ||||| ||||| ||||| || ||||| Sbjct 225 AGATCAATGATCTCACCACT-GCAGGTGAGTTTACCTTGTCCAGCTAAATAGAGTGGGTA 283 Query 96797 AAAGAAACCACTATAAAATAGGAACGACTCT--AAGAACACAGAGGCTACAATTGCCATA 96854 ||||| || || ||||| | || ||| | || | || || || | || |||||| Sbjct 284 GAAGAATCCGCTGTAAAACA--AATAACTTTCCAAAAGTACGGAAGCGGCCATCGCCATA 341 Query 96855 TATAAGTCTTTCTTTGTTTCAATGTTGCGGTAATATTTGTCAATGATAGACACTTTCTTT 96914 ||||| ||||| ||||||||||| ||||| | || | | | |||| || Sbjct 342 TATAAATCTTTTGAAGTTTCAATGTTCATATAATACTGACGTATAACCGTCGCTTTGGTT 401 Query 96915 TGTAGATATTTATTCTCAGCGACCCAATCAAATACATCGTCGATTTCTTCCTTTGTGGCT 96974 || |||||| ||| || | ||||| | |||||||| ||| ||||| || ||| ||| Sbjct 402 TGCAGATATGGATTTTCTTCCACCCATTTAAATACATTGTCAATTTCCTCGGTTGAGGCC 461 Query 96975 AATGTTGTAAAAATTGTACTATAAGATTTTGCATGGATGCCTTCCATCATTCCCATAAA 97033 ||||| |||||||| | || || ||||| ||||| || ||||||||| ||||||| Sbjct 462 AATGTAGTAAAAATACTGCTGTAGGATTTCGCATGAATTTGTTCCATCATCGCCATAAA 520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429498937545781