Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_028805.1
Length=126341
Score E
Sequences producing significant alignments: (Bits) Value
seq3052 118 9e-22
>seq3052
Length=1679
Score = 118 bits (130), Expect = 9e-22
Identities = 189/268 (71%), Gaps = 4/268 (1%)
Strand=Plus/Plus
Query 111395 CTTCTCGATAGCTTTGATCAGCTTACGCTTCAAGTCTTTATCTTTCAGATCATCCTTGTG 111454
|||||| |||||||| | || ||||| || | ||| ||||| || ||||| ||
Sbjct 238 CTTCTCAATAGCTTTCACGAGTTTACGGCGCAGTTTCACATCCTTCAGGTCGTCCTTATG 297
Query 111455 AAGTGTAGTCTTCAGGACACGCATGCCACAACCAATGTCAGAACCCACGATAGAGGGTGA 111514
| | ||| | | || ||||||||||| || |||||| || ||||| || || ||
Sbjct 298 CAAATTGGTCATATGCACCCGCATGCCACAGCCGATGTCACTGCCTACGATGGATGGAGA 357
Query 111515 AACGAATCC-GTCTT-TCATGTTCCAGACGGCGGTTGTGCCTATGCACGTCCCCACCCCA 111572
|| ||||| |||| || | ||| || || |||||||| ||||| || || || ||
Sbjct 358 TACAAATCCACTCTTGGCA--TCCCATACCGCAGTTGTGCCGATGCAGGTACCTACACCG 415
Query 111573 ACGTGAGCATCTGGCGTATAAGACATGTGTATGTTACGCGGTATTGCAAGGTTGTTATTC 111632
|| || |||| ||||| ||| ||| | ||| ||| ||| ||| ||||| |||
Sbjct 416 ACATGCACATCAGGCGTGTAACTCATATAGGAAATACCCGGGATTTGAAGATTGTTGTTC 475
Query 111633 GCCATGTCGAAGACCTTATGCTCCAATG 111660
||||| ||||| ||||||| |||||||
Sbjct 476 GCCATCTCGAACACCTTATAATCCAATG 503
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 404128515841402
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |