Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_028805.1 Length=126341 Score E Sequences producing significant alignments: (Bits) Value seq3052 118 9e-22 >seq3052 Length=1679 Score = 118 bits (130), Expect = 9e-22 Identities = 189/268 (71%), Gaps = 4/268 (1%) Strand=Plus/Plus Query 111395 CTTCTCGATAGCTTTGATCAGCTTACGCTTCAAGTCTTTATCTTTCAGATCATCCTTGTG 111454 |||||| |||||||| | || ||||| || | ||| ||||| || ||||| || Sbjct 238 CTTCTCAATAGCTTTCACGAGTTTACGGCGCAGTTTCACATCCTTCAGGTCGTCCTTATG 297 Query 111455 AAGTGTAGTCTTCAGGACACGCATGCCACAACCAATGTCAGAACCCACGATAGAGGGTGA 111514 | | ||| | | || ||||||||||| || |||||| || ||||| || || || Sbjct 298 CAAATTGGTCATATGCACCCGCATGCCACAGCCGATGTCACTGCCTACGATGGATGGAGA 357 Query 111515 AACGAATCC-GTCTT-TCATGTTCCAGACGGCGGTTGTGCCTATGCACGTCCCCACCCCA 111572 || ||||| |||| || | ||| || || |||||||| ||||| || || || || Sbjct 358 TACAAATCCACTCTTGGCA--TCCCATACCGCAGTTGTGCCGATGCAGGTACCTACACCG 415 Query 111573 ACGTGAGCATCTGGCGTATAAGACATGTGTATGTTACGCGGTATTGCAAGGTTGTTATTC 111632 || || |||| ||||| ||| ||| | ||| ||| ||| ||| ||||| ||| Sbjct 416 ACATGCACATCAGGCGTGTAACTCATATAGGAAATACCCGGGATTTGAAGATTGTTGTTC 475 Query 111633 GCCATGTCGAAGACCTTATGCTCCAATG 111660 ||||| ||||| ||||||| ||||||| Sbjct 476 GCCATCTCGAACACCTTATAATCCAATG 503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404128515841402