Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_029073.1
Length=141298
Score E
Sequences producing significant alignments: (Bits) Value
seq7291 196 4e-45
>seq7291
Length=1905
Score = 196 bits (216), Expect = 4e-45
Identities = 476/721 (66%), Gaps = 0/721 (0%)
Strand=Plus/Plus
Query 48768 CATATCTGTAATGACTGCAATTGTTTTTCGATTCAGATTTTTTCCAATATCAACCATTTC 48827
|||||| | |||||| || || ||||| || | ||| || || || ||||| |
Sbjct 732 CATATCGGAAATGACAGCCATCGTTTTGCGGCCAACATTGTTACCGATGCTTACCATGGC 791
Query 48828 TTGTGCTAATGCTTTAGAGTCTTCTAATGTTTTCATAAATGCTCCATTTCCTGTTTTAAC 48887
||||| | | |||| | ||||| || ||||| ||||| || |||||||| ||
Sbjct 792 ATGTGCCAGTTCTTTTGCATCTTCCGTAGTCTTCATGAATGCACCCGCACCTGTTTTGAC 851
Query 48888 ATCTAATACAATTGCATCTGCTCCCATTGCGAtttttttACTCATAATGCTACTAGCAAT 48947
||| | ||| || ||||| || || ||| ||||| |||||||| ||| || || ||
Sbjct 852 ATCCAGTACGATGGCATCGGCACCTGCTGCAATTTTCTTACTCATGATGGAGCTGGCGAT 911
Query 48948 TAATGGAATTGAATTAACTGTTCCAGTAACATCGCGTAATGCATATAATTTTTTGTCGGC 49007
| ||| || || || || || | ||||| || || |||||||| | |||||||| ||
Sbjct 912 CAGTGGGATGGAGTTCACGGTAGCTGTAACGTCACGCAATGCATAGAGCTTTTTGTCTGC 971
Query 49008 AGGCACTAAAATTCCACTTTGTCCAACTAATGCGATTTTATGTGTATTAACTTGATTAAT 49067
|| | | ||||||||||| | | || | ||||||| ||||| | ||
Sbjct 972 TGGTGTGAGGTTGCCACTTTGTCCGATAACCGCCACTTTATGTTCGTTAACGAGTCGGAT 1031
Query 49068 AAATTGTTCTCTTGTTAATTCTACGTTAAAGCCTTGTATAGATTCTAATTTGTCAATTGT 49127
|| | |||| | | ||||| | |||||| | ||||| | |||||| ||||
Sbjct 1032 GAACTCTTCTTTCTCCAGCTCTACATGGAAGCCTGCAACGGATTCCAGTTTGTCTGTTGT 1091
Query 49128 TCCTCCTGTGTGCCCTAAACCTCTACCTGACATTTTAGCAACAGGAATACCCAAAGAAGC 49187
|| || ||||| || || || | || |||||||| |||||||||| | | | || ||
Sbjct 1092 ACCACCAGTGTGACCCAATCCACGTCCGGACATTTTGGCAACAGGAACATCGAGAGCTGC 1151
Query 49188 AACCAATGGAGCAACGATTAAACTAATTTTATCGCCGACTCCACCTGTGGAATGTTTATC 49247
||| | ||| || | | | | | ||||||| || || || ||||| || || ||
Sbjct 1152 AACGAGTGGTGCCAGTACCAGCGTTGTGGTATCGCCTACGCCTCCCGTGGAGTGCTTGTC 1211
Query 49248 TACTTTTACACCTTCGATTTTTGATAGGTCAATTGTTTCACCAGAATTAATCATGGCATT 49307
|||||| | |||||| ||| || || ||||| || || || || || | ||| | |
Sbjct 1212 TACTTTGATACCTTCAATTGCGGACAGATCAATCGTCTCGCCCGAGTTCACCATAGACAT 1271
Query 49308 AGTTAAGGCAGAGATTTCTTCTTTAGACATGCCATTGAAATAAATTGCCATTAACATAGA 49367
|| || | | | ||| | | | ||| | ||||| | || ||||| | ||
Sbjct 1272 GGTCAAATCTGCGCGTTCCTTGTCCGTCATATCCTTGAAGAATATGGCCATCGCCCAAGC 1331
Query 49368 AGCCATTTGATAATCAGGAATGTCGCCGTTCGTGTAACCGCGGATGATAAAATCAATTTC 49427
| ||| ||||| || || || || | ||| || || | | | ||||||||| ||
Sbjct 1332 GCTGACTTGGTAATCCGGGATTTCCCCTTGCGTATATCCTTGAACAACAAAATCAATCTC 1391
Query 49428 TTCTTTTGAAAGCTCATAACCATCCCGTTTTTTCGCAATTAAATCGACCATTCTCATGAT 49487
| ||| || || | || || || || || ||||| | || ||||||||||||||
Sbjct 1392 AGCAGTTGTCAGTTCTTTTCCGTCGCGCTTCTTAGCAATAATGTCTACCATTCTCATGAT 1451
Query 49488 G 49488
|
Sbjct 1452 G 1452
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451982143388880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |