Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_030920.1 Length=165868 Score E Sequences producing significant alignments: (Bits) Value seq7001 150 2e-31 seq5394 111 2e-19 >seq7001 Length=2844 Score = 150 bits (166), Expect = 2e-31 Identities = 547/842 (65%), Gaps = 33/842 (4%) Strand=Plus/Plus Query 97816 TCTCAACTAGAGACAGGCACACCTTACATGTTCTACCGTGATACAGTAAACCGTGCTAAC 97875 || ||||| || ||||| || ||||||||||||||||| ||||| || |||||| | || Sbjct 1457 TCCCAACTGGAAACAGGTACGCCTTACATGTTCTACCGGGATACCGTCAACCGTTCGAAT 1516 Query 97876 CAAAACAA-GCACGCGGGTATGATCTACTGTTCAAACCTTTGTGTAGAAATCACACAAAA 97934 | ||||| |||| | || ||| | |||| ||| ||||||||| ||||||| || || Sbjct 1517 CCGAACAATGCACAC-GGCATGGTGTACTCTTCCAACCTTTGTACTGAAATCATGCAGAA 1575 Query 97935 CCAAGGAACAACAGTCGTAACAGAGGAA------ATAACAGAAGACGGTAA------GAT 97982 |||| |||| || || | ||||| |||| |||| || | || Sbjct 1576 CCAATCTGCAACGGTAGTTGAAAAGGAAGAGCTCGTAACCAAAGATGGACAAACCCGCAT 1635 Query 97983 CGTTATTACAAAAAGCCCTGGTGACTTTGTAGTATGTAA-CTTATCTTCTATTAACTTAG 98041 ||| ||| | ||| || || || || |||||||| || || | | || ||| |||| | Sbjct 1636 CGTGATTTCCAAAGTGCCGGGCGATTTCGTAGTATGCAATCTGAAC-TCCATTCACTTGG 1694 Query 98042 CTCGCGCTGTAACAGACGAAGTACTAGAGCGACTAATCCCAATTCAAATTCGTATGTTAG 98101 | || || || | | || ||| | ||||| || | || ||||| |||||||| ||| Sbjct 1695 CACGTGCCGTGCCTCATGATGTATTGGAGCGTCTGGTACCGATTCAGGTTCGTATGCTAG 1754 Query 98102 ACAACGTAATTGAGCTGAATGATATCCCTGTACTACAAGCTAAGTTATCTAACCAGAAAT 98161 |||||||||| || | || | || || || ||||| | | | ||| ||| Sbjct 1755 ACAACGTAATCGACATCAACAACATTGAAGTGCTGCAAGCCCAATACACCAACAGCCAAT 1814 Query 98162 ATCGTGCAGTCGGCTTAGGTACATTCGGATGGAACCACTTACTAGCTCTTAAAAAGATTG 98221 | ||||| || || | || ||||||||| | ||| | || ||||| || ||| Sbjct 1815 ACCGTGCGGTTGGTCTGGGAACATTCGGACTCCATCACCTGCTTGCTCTCGAAGGCATTC 1874 Query 98222 CATGGGAAACAGACGAAGCAGTAGAGTATTGTGATAGCCTTTACGAAGATATTGCTTACT 98281 |||||| | || |||||||| ||| |||| || || ||| | ||| || Sbjct 1875 GTTGGGAATCGGAAGAAGCAGTCACATATAACGATAATCTGTATGAAAAAATTAACTATC 1934 Query 98282 TAACAGTTCAAGCTTCTATGGAGCTTTCAAAAGAGAAAGGTGCTTATCCTGCATTCCCTG 98341 | || |||| ||||| || || || || ||||| |||||| ||||| | Sbjct 1935 TGCTCGTGAAAGCCAGCATGGAACTGTCCAAGGAAAAAGGACATTATCCGAAATTCCAAG 1994 Query 98342 GGTCAGAATTCGATACAGGCGAGTACTTCTTCAAGCGAGGATATA--TC----GAACGTG 98395 | || || | | |||||| | |||||| | | || | || | || || || | Sbjct 1995 GTTCCGATTGGCAAACAGGCAAATACTTCGACCAACGGGATTACACGTCAGGTGAGCGCG 2054 Query 98396 GAG--GAAGTAACGTAAAAGAAGGACGTGACTGGAACCAATTAGCTA-TCGACGTTCATG 98452 || ||| | ||| | | | || | ||||| || | || | | | || || Sbjct 2055 TAGGCGAATT--CGTTACAACTGAAC---AATGGAAAGAACT-GCAAGCCCAAGTACAGC 2108 Query 98453 ACAATGGTGTACGTAACGGTTACTTAATGGCTGTAGCACCTAACGGAACTACATCTATCA 98512 | || ||||||||||||| | || | || | ||||| || || | || || |||| Sbjct 2109 AAAACGGTGTACGTAACGCCTGGTTGTTCGCCATTGCACCAAATGGTTCAACGTCCATCA 2168 Query 98513 TTGCAGGATCAACAGCAAGTATCGACCCTATCTTCCGTA-AGTTCTATTCAGAAGAGAAA 98571 |||| || |||||||| || || || || | || || | ||| | | ||||||||| Sbjct 2169 TTGCCGGTTCAACAGCCAGCATTGATCCGCT-TTACGAACTGTTGTCCTATGAAGAGAAA 2227 Query 98572 AAGAACTACAAGATTCCGGTAACTGCACCAGACTTATCGCCAGCTACAACATGGTACTAC 98631 | || ||||||||| | | ||||| ||| |||| | || | ||||||||| Sbjct 2228 ACGACTTACAAGATTGCCAACCCGGCACCTGACCTATCCGAAAAAACGATCTGGTACTAC 2287 Query 98632 AA 98633 || Sbjct 2288 AA 2289 >seq5394 Length=920 Score = 111 bits (122), Expect = 2e-19 Identities = 166/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 132752 AATATGAGATTAGTGTGGAACGTAGTACATCGGTTTATCAATAGGGGTTATCTTCCCGAA 132811 || || ||| | || ||| ||| ||||| || ||||| || ||||| ||| || ||| Sbjct 185 AACATCAGACTCGTCTGGTCCGTCGTACAACGTTTTATGAACAGGGGATATGAGCCGGAA 244 Query 132812 GACCTATTCCAAATTGGTTGTATAGGTTTGCTGAAGAGTATTGATAAATTCGACCTTGAC 132871 || || || || ||||||||||| || |||| || | ||||||||||| || Sbjct 245 GATCTGTTTCAGATTGGTTGTATCGGGCTGCTCAAATCGGTGGATAAATTCGATCTCAGT 304 Query 132872 TACGATGTTGCTTTTTCTACCTACGCTGTTCCTATGATTATTGGAGAGATTCAAAGGTTT 132931 || ||||| || || ||||| ||||| || |||||||| ||||| ||||| | || Sbjct 305 TATGATGTGAAATTCTCCACCTATGCTGTCCCGATGATTATCGGAGAAATTCAGCGTTTC 364 Query 132932 ATTAGGGATGATGGAACCGTAAAGGTACCTCGAACAATTAAGGAGTTAGCAAATAA 132987 | |||||||||| || | ||||| ||| || | ||||| | || ||||| Sbjct 365 CTGCGGGATGATGGTACACTCAAGGTCAGTCGTTCACTCAAGGAAATGGCGAATAA 420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530598584674080