Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_031039.1
Length=251042
Score E
Sequences producing significant alignments: (Bits) Value
seq6896 140 5e-28
seq6679 131 3e-25
seq928 86.0 1e-11
>seq6896
Length=3285
Score = 140 bits (154), Expect = 5e-28
Identities = 294/434 (68%), Gaps = 6/434 (1%)
Strand=Plus/Plus
Query 144877 GCAACATCTGATGGTAAAAACATTGAAATGGATATTGCTTATAACTATGTTGTACAACCA 144936
|| || |||||||| || ||||| ||| ||| ||||||||||||| ||| |||||
Sbjct 30 GCGACTTCTGATGGGAAGAACATCACAATTGATTTTGCTTATAACTACCAAGTAGAACCA 89
Query 144937 GATAAAGTAGTAGATGTATTTAATAAGTTTGGTTCAGTTAAAGTTGAACAAATTGAGAAT 144996
||||||| | |||| |||| ||||| || ||| || || |||||||| ||
Sbjct 90 AGTAAAGTATCTTCTATATTCAATACATTTGGGCCAATTAGCATTCAAGAAATTGAGGAT 149
Query 144997 TCATATCTTAAATCACGTTTATGGGATGCCTCTCGTAAAGTGATCTCTAAATATTCAGTA 145056
||||||| ||| ||||||| | || | ||||||||| ||||| || | | ||||
Sbjct 150 ACATATCTCAAAACACGTTTCCGTGACTCAGCTCGTAAAGGTATCTCCAAGTTTACAGTC 209
Query 145057 ATTGATACTTATGGTCAAAAATCTTCAGAAGCGGCTAGTGAAATTCAAAAAAC-ATTTGC 145115
|||||| |||||| |||| || || ||||| | |||| | || || ||| ||| |
Sbjct 210 ATTGATGTATATGGTGAAAAGTCATCCGAAGCAG-GAGTGGATGTCCAACAACGTTTTTC 268
Query 145116 TGAAGATATGAAGAAATATGGTTTTATTATTGATGATCTTACTTTAGGTGTGCCAAAGCC 145175
||| || | || | | || |||||| | | |||| ||||||| || | ||
Sbjct 269 TGATGACGTTAAAGAGTTAGGCTTTATTGTATCCAACGTTACCGTAGGTGTTCCTCAACC 328
Query 145176 AGAT--AAAGCTACTCAAGATGCAATTGATGCTAGAGTTAAATCTTCTCAGGAATTAGAA 145233
||| ||| ||||| || ||||| ||| | ||| || | ||||| ||| | |||
Sbjct 329 TGATGCTAAG--ACTCAGGAAGCAATCGATAAGCGTGTTGAAGCCTCTCAAGAACTGGAA 386
Query 145234 CGTTCTCAAACTGAAATCAAGATTGCTAAAGCAGATGCTGAGAGGAAGAAAATTGAAGCT 145293
||| |||||| | |||| || || ||| || || | ||| | |||||
Sbjct 387 CGTAAAACGACTGAACTTGAGATCGCCAAGAAAGAAGCAGAACGTAAGCGCGTGGAAGCG 446
Query 145294 CAAGGTGTTGCAGA 145307
|||||| ||||||
Sbjct 447 CAAGGTAATGCAGA 460
>seq6679
Length=1512
Score = 131 bits (144), Expect = 3e-25
Identities = 237/342 (69%), Gaps = 6/342 (2%)
Strand=Plus/Plus
Query 191911 ATCATACATTACATCTAAATCCATCTCATCTAAAGGAATTCCATATTCTTTTTCGACACT 191970
||||||||| ||||| | |||||| ||||| ||| | ||||||| | || | ||||||
Sbjct 1113 ATCATACATCACATCCAGATCCATATCATCCAAATGTGTTCCATACGCCTTATAGACACT 1172
Query 191971 ATAAGGAGAGAATGTATAGAACTCTTC-TTCTCCTGATTCTAGCAATTGAATAAATTTAT 192029
|||||| | ||| ||| || || || || ||| | ||| | | ||| ||
Sbjct 1173 ATAAGGTGCGAAGAGATACAAGGGCTCATTATCTTGAGCC-AGC---TTATAAAAACGAT 1228
Query 192030 CAGGAACAATAATTCCAGTTGAAAGTGTTTTCATACGAATGCTATCGTCAGCATTGAttt 192089
|||||| |||| ||| | || || ||||||| ||| || | ||||| |||||||| |
Sbjct 1229 TAGGAACGATAAGTCCGATAGAGAGAGTTTTCAGACGGATTTTCTCGTCCGCATTGATCT 1288
Query 192090 ttttAGTATTTAGGAAATGAATAATATCCCCATGAAAAATATTAAGATAAACAGCTCCTG 192149
||||| | | || | | |||| |||| | ||||||||| || | || || |
Sbjct 1289 TTTTACTGTCCAGCAGTTCCATAACGTCCCAACCGAAAATATTATAGTATGCTGCGCCAG 1348
Query 192150 AGCCTTTGCGTTGACCCATCTGATCAGCATAAGAGAAACTTTGTTCCAATAATTTCATTA 192209
| || || ||||||||||||||||| || |||||||||| | |||| | || | |
Sbjct 1349 AACCCTTCCGTTGACCCATCTGATCGGCGTAAGAGAAACCATCCTCCATCAGCTTGAGAA 1408
Query 192210 CAGGAATAACACCTTTAGCGGCATTTTCTTCACCATTTACTG 192251
|||| ||| ||||| || || ||| |||| |||| ||
Sbjct 1409 CAGGCGTAATGCCTTTCGCAGCCCCTTCGACACC-TTTAATG 1449
>seq928
Length=525
Score = 86.0 bits (94), Expect = 1e-11
Identities = 98/129 (76%), Gaps = 2/129 (2%)
Strand=Plus/Minus
Query 144723 AATTCCAAATGGATATGTTGGTGTAGTTTATTCCCCTAATGGTGGAGTAAAAGAGACTAC 144782
|||||| ||||||||||| || || || ||||| || ||||| || |||||||| | |||
Sbjct 128 AATTCCTAATGGATATGTCGGGGTTGTATATTCACCCAATGGAGGCGTAAAAGATAGTAC 69
Query 144783 ACTTGATCAAGGTTGG-CATTGGATCAAGCCTTTTGATAAAGTTACAGAATATCCAGTTC 144841
||| |||||| ||| | | | | || | ||||||||||| || ||||||| |||
Sbjct 68 ACTGAGTCAAGGGTGGAAACTCGTTGGAG-CGTTTGATAAAGTAACGAAATATCCGATTC 10
Query 144842 GCATGCAAA 144850
| || ||||
Sbjct 9 GAATTCAAA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 803129181744720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |