Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_031039.1 Length=251042 Score E Sequences producing significant alignments: (Bits) Value seq6896 140 5e-28 seq6679 131 3e-25 seq928 86.0 1e-11 >seq6896 Length=3285 Score = 140 bits (154), Expect = 5e-28 Identities = 294/434 (68%), Gaps = 6/434 (1%) Strand=Plus/Plus Query 144877 GCAACATCTGATGGTAAAAACATTGAAATGGATATTGCTTATAACTATGTTGTACAACCA 144936 || || |||||||| || ||||| ||| ||| ||||||||||||| ||| ||||| Sbjct 30 GCGACTTCTGATGGGAAGAACATCACAATTGATTTTGCTTATAACTACCAAGTAGAACCA 89 Query 144937 GATAAAGTAGTAGATGTATTTAATAAGTTTGGTTCAGTTAAAGTTGAACAAATTGAGAAT 144996 ||||||| | |||| |||| ||||| || ||| || || |||||||| || Sbjct 90 AGTAAAGTATCTTCTATATTCAATACATTTGGGCCAATTAGCATTCAAGAAATTGAGGAT 149 Query 144997 TCATATCTTAAATCACGTTTATGGGATGCCTCTCGTAAAGTGATCTCTAAATATTCAGTA 145056 ||||||| ||| ||||||| | || | ||||||||| ||||| || | | |||| Sbjct 150 ACATATCTCAAAACACGTTTCCGTGACTCAGCTCGTAAAGGTATCTCCAAGTTTACAGTC 209 Query 145057 ATTGATACTTATGGTCAAAAATCTTCAGAAGCGGCTAGTGAAATTCAAAAAAC-ATTTGC 145115 |||||| |||||| |||| || || ||||| | |||| | || || ||| ||| | Sbjct 210 ATTGATGTATATGGTGAAAAGTCATCCGAAGCAG-GAGTGGATGTCCAACAACGTTTTTC 268 Query 145116 TGAAGATATGAAGAAATATGGTTTTATTATTGATGATCTTACTTTAGGTGTGCCAAAGCC 145175 ||| || | || | | || |||||| | | |||| ||||||| || | || Sbjct 269 TGATGACGTTAAAGAGTTAGGCTTTATTGTATCCAACGTTACCGTAGGTGTTCCTCAACC 328 Query 145176 AGAT--AAAGCTACTCAAGATGCAATTGATGCTAGAGTTAAATCTTCTCAGGAATTAGAA 145233 ||| ||| ||||| || ||||| ||| | ||| || | ||||| ||| | ||| Sbjct 329 TGATGCTAAG--ACTCAGGAAGCAATCGATAAGCGTGTTGAAGCCTCTCAAGAACTGGAA 386 Query 145234 CGTTCTCAAACTGAAATCAAGATTGCTAAAGCAGATGCTGAGAGGAAGAAAATTGAAGCT 145293 ||| |||||| | |||| || || ||| || || | ||| | ||||| Sbjct 387 CGTAAAACGACTGAACTTGAGATCGCCAAGAAAGAAGCAGAACGTAAGCGCGTGGAAGCG 446 Query 145294 CAAGGTGTTGCAGA 145307 |||||| |||||| Sbjct 447 CAAGGTAATGCAGA 460 >seq6679 Length=1512 Score = 131 bits (144), Expect = 3e-25 Identities = 237/342 (69%), Gaps = 6/342 (2%) Strand=Plus/Plus Query 191911 ATCATACATTACATCTAAATCCATCTCATCTAAAGGAATTCCATATTCTTTTTCGACACT 191970 ||||||||| ||||| | |||||| ||||| ||| | ||||||| | || | |||||| Sbjct 1113 ATCATACATCACATCCAGATCCATATCATCCAAATGTGTTCCATACGCCTTATAGACACT 1172 Query 191971 ATAAGGAGAGAATGTATAGAACTCTTC-TTCTCCTGATTCTAGCAATTGAATAAATTTAT 192029 |||||| | ||| ||| || || || || ||| | ||| | | ||| || Sbjct 1173 ATAAGGTGCGAAGAGATACAAGGGCTCATTATCTTGAGCC-AGC---TTATAAAAACGAT 1228 Query 192030 CAGGAACAATAATTCCAGTTGAAAGTGTTTTCATACGAATGCTATCGTCAGCATTGAttt 192089 |||||| |||| ||| | || || ||||||| ||| || | ||||| |||||||| | Sbjct 1229 TAGGAACGATAAGTCCGATAGAGAGAGTTTTCAGACGGATTTTCTCGTCCGCATTGATCT 1288 Query 192090 ttttAGTATTTAGGAAATGAATAATATCCCCATGAAAAATATTAAGATAAACAGCTCCTG 192149 ||||| | | || | | |||| |||| | ||||||||| || | || || | Sbjct 1289 TTTTACTGTCCAGCAGTTCCATAACGTCCCAACCGAAAATATTATAGTATGCTGCGCCAG 1348 Query 192150 AGCCTTTGCGTTGACCCATCTGATCAGCATAAGAGAAACTTTGTTCCAATAATTTCATTA 192209 | || || ||||||||||||||||| || |||||||||| | |||| | || | | Sbjct 1349 AACCCTTCCGTTGACCCATCTGATCGGCGTAAGAGAAACCATCCTCCATCAGCTTGAGAA 1408 Query 192210 CAGGAATAACACCTTTAGCGGCATTTTCTTCACCATTTACTG 192251 |||| ||| ||||| || || ||| |||| |||| || Sbjct 1409 CAGGCGTAATGCCTTTCGCAGCCCCTTCGACACC-TTTAATG 1449 >seq928 Length=525 Score = 86.0 bits (94), Expect = 1e-11 Identities = 98/129 (76%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 144723 AATTCCAAATGGATATGTTGGTGTAGTTTATTCCCCTAATGGTGGAGTAAAAGAGACTAC 144782 |||||| ||||||||||| || || || ||||| || ||||| || |||||||| | ||| Sbjct 128 AATTCCTAATGGATATGTCGGGGTTGTATATTCACCCAATGGAGGCGTAAAAGATAGTAC 69 Query 144783 ACTTGATCAAGGTTGG-CATTGGATCAAGCCTTTTGATAAAGTTACAGAATATCCAGTTC 144841 ||| |||||| ||| | | | | || | ||||||||||| || ||||||| ||| Sbjct 68 ACTGAGTCAAGGGTGGAAACTCGTTGGAG-CGTTTGATAAAGTAACGAAATATCCGATTC 10 Query 144842 GCATGCAAA 144850 | || |||| Sbjct 9 GAATTCAAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 803129181744720