Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq260 111 4e-19
>seq260
Length=339642
Score = 111 bits (122), Expect = 4e-19
Identities = 150/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || ||||| ||||| || |||||||||||||| | | || | || || || |
Sbjct 135406 CAAG-TGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGTGTCCGGCCGTCCTCAA 135464
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || ||||||||||| || | ||||||||||| | ||| || ||||| ||||| |
Sbjct 135465 GCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGGA 135524
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| ||| ||||| | || | |||| || || ||||| || || ||||| ||||
Sbjct 135525 TCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGTGATAGTCTTGC 135584
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| ||||| ||||| ||||| | |||||
Sbjct 135585 CGGTGAGTGTCTTGACGAAAATTTGCAT 135612
Score = 104 bits (114), Expect = 5e-17
Identities = 151/210 (72%), Gaps = 5/210 (2%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || ||||| || ||||| ||||||||||| |||| | ||| | ||||| || |
Sbjct 135634 CAAG-TGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTCGA 135692
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || || || || || | ||||||||| | | ||| || ||||| || || |
Sbjct 135693 GCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGA 135752
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
| || |||||| | || | | ||| ||| | ||| || || || || || || ||
Sbjct 135753 TCTTCGACTTGACATTGTCGATGGTGTCGCTGGA--CTCGACCTCGAGGGTGATGGTCTT 135810
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| ||||||||||| ||||||| ||||||
Sbjct 135811 GCCGGTGAGAGTCTTGACGAAGATCTGCAT 135840
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153707101416661
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |