Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq5 147 3e-30
>seq5
Length=10013798
Score = 147 bits (162), Expect = 3e-30
Identities = 451/688 (66%), Gaps = 22/688 (3%)
Strand=Plus/Plus
Query 53996 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 54055
|| ||||| | || ||| || |||| | || || || ||||| ||||| || || |||
Sbjct 2425582 GGGCACATGAGCGTCCAGTCGCCGTTCTTCTCGACGCGCTTCATGAAGAGGTCGGGGATC 2425641
Query 54056 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 54115
|| || || | || || || | | | ||||| || || ||||| ||
Sbjct 2425642 CAGAGCGCGAGGAACAGGTCGCGCGCGCGCACCTCCTCCTTGCCGTGGTTCTTGCGCAGG 2425701
Query 54116 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGC 54175
||||| ||| | | || || | ||||||||||||| ||| |||| | | || |||
Sbjct 2425702 TCGAGAAACTCAAAAACGTCGGCGTGCCACGGTTCCAGGTAGATGGCGAAGGCGCCCGGC 2425761
Query 54176 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 54235
|| ||||| || ||||| || | ||| | || ||||| || | || | | ||| ||
Sbjct 2425762 CGCTTGTTGCCGCCCTGGTCGACGTACCGGGCCGTGTTGTTGAAGACGCGAAGCATGGGC 2425821
Query 54236 ATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTA 54295
| || || ||||| | ||| ||||| |||| || ||| ||| |||| || ||
Sbjct 2425822 GTGATGCCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGATCCGGTGGCGCGGATGCGG 2425881
Query 54296 CTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGT 54354
|| || || || || || ||||| || ||||| | ||||| ||| || | |||
Sbjct 2425882 TGGATGTTGAGGCCGATGCCGCCGGCCATCTTGGAGATCATGGCGCA-CGTCTTGAGCGT 2425940
Query 54355 ATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG 54414
|| ||||||||||| || || || ||| |||||| | || || || |||| ||
Sbjct 2425941 GTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGACGACAGCTG 2426000
Query 54415 ---GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC 54471
|| || | || || || || || | || || || |||||||| || ||| || |
Sbjct 2426001 CGCCTG-CGGC--GTGCCGGCGTTGAAGAGCGTCGGCGAGGCGTGCGTGAA-CATCTTGC 2426056
Query 54472 -AGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATAT------CCCATTGATGAATTC 54524
|| | ||||||||||||||||| | || || | |||| |||| |
Sbjct 2426057 TCGACATGAGATTGTACGTCTCGATGACGCGCTCGATGTTGTCGCCCCA--GATG----C 2426110
Query 54525 CTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCA 54584
| || | || ||||| | ||||||||| |||| || ||||||||| ||| | || |
Sbjct 2426111 CGACCGACACGCGCATGATCATGTGCTGCGGTCGCTCGACGATCTTGCCGTTGAGCTTGA 2426170
Query 54585 GCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGT 54644
| | ||||||| || | ||| || || ||||| || | ||| ||||| || ||||
Sbjct 2426171 GGAGGTAGGATCGCTCGAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGT 2426230
Query 54645 AAATAATAACTGAGTTGAGTTTATCCTT 54672
| | || | |||| ||| | |||||
Sbjct 2426231 AGACGATGGCCGAGTCGAGCTCCTCCTT 2426258
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721043386000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |