Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq2 178 1e-39
seq11 156 4e-33
seq5 138 1e-27
>seq2
Length=5461500
Score = 178 bits (196), Expect = 1e-39
Identities = 316/456 (69%), Gaps = 14/456 (3%)
Strand=Plus/Plus
Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041
||||||| || ||||| ||||| |||||| | || ||| || | |||| | | | |
Sbjct 1981732 AGAAGGCTGATTGGGCCCTGCGTTGGATCCAAGACAAGGAGTCCACGTTCGCCCAAAGAC 1981791
Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101
| || ||||| || |||||||| ||| ||||||| || ||||||| | || || |
Sbjct 1981792 TTGTTGCCTTTGCCGCCGTCGAAGGCATCTTCTTCAGCGGTGCTTTCGCCTCAATCTTCT 1981851
Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161
|||| ||||| ||||| |||||||| || ||||| ||| ||||||||||||||| | |
Sbjct 1981852 GGCTGAAGAAGCGCGGTCTCATGCCTGGTCTGACATTCTCCAACGAGCTCATCTCGCGTG 1981911
Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTG--GTGCAGCGACC 117219
| |||||||| || ||| ||||| || ||||| ||||| | || | |||
Sbjct 1981912 ATGAGGGTCTTCACACCGATTTTGCGTG---CCTGTT---GCATTCGCACCTCAACAACC 1981965
Query 117220 G----AGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCT 117275
| ||| | | | ||| || ||| |||||||||| ||| |||| |||||| |
Sbjct 1981966 GGGCCAGCAAGAAGGTCATCAACGACATCATCACCGACGCCGTCACCATTGAGCAGGAGT 1982025
Query 117276 TCCTCACCGAAGCGCTGCC-GGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAA 117334
|||||||||| || || || |||| |||||| || | ||| | |||| |||
Sbjct 1982026 TCCTCACCGAGGCCCTCCCATGTGC-TCTGCTCGGCATGAATGCCACCTTGATGAAGCAG 1982084
Query 117335 TACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAAC 117394
|||||||||||||| ||||| | || || | | || | | || ||| |||||
Sbjct 1982085 TACATCGAGTTCGTTGCCGATCGTCTCCTTGTTGCTCTCGGCAACGAGAAGGTGTACAAA 1982144
Query 117395 ACGCCCAACCCGCTGGACTTTATGAACCTCATCTCC 117430
|| | ||||| | ||||| ||| | |||||||
Sbjct 1982145 TCGTCGAACCCCTTCGACTTCATGGAGAACATCTCC 1982180
Score = 170 bits (188), Expect = 2e-37
Identities = 209/285 (73%), Gaps = 3/285 (1%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| |||||||||||||| |||||||| | ||| ||| | || ||
Sbjct 1981312 ATCTGGCAAATGTACAAGAAGGCCGAGGCGTCCTTCTGGACGGCCGAAGAGATCGATCTT 1981371
Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
|||||||| | ||||||| | || ||||| ||| | ||||| ||||| || |
Sbjct 1981372 TCCAAGGATTTGCACGACTGGAACAACCGTTTGAATGACGATGAGCGGTATTTCGTCTCG 1981431
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
||| | || || || |||||||| ||||| |||||||||||||| || ||||| |||
Sbjct 1981432 CACATTCTCGCTTTCTTCGCCGCTTCGGACGGAATCGTCAACGAGAACCTTGTCGAACGT 1981491
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872
||| |||||||| | ||||||| || ||||||||||| || || ||| |||
Sbjct 1981492 TTCAGCGGCGAGGTGCAAATCCCCGAGGCTCGCTGCTTCTACGGTTTCCAAATCATGATG 1981551
Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917
|| || | ||||| || | || ||| | | |||||| |||||
Sbjct 1981552 GAAAATATCCACTCCGAGACCTACTCGCTCTTGATCGACTCGTAC 1981596
>seq11
Length=1832425
Score = 156 bits (172), Expect = 4e-33
Identities = 168/220 (76%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| || || |||||||| || || |||||| | || || || |
Sbjct 1806603 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 1806662
Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
|||||| | | | |||| ||||| || || | ||||| |||||||||||| | ||
Sbjct 1806663 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 1806721
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
||| || || ||||||| ||| ||||| ||||| || || | |||||||| | ||||||
Sbjct 1806722 CCAACAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACCCTGAGCGACTA 1806781
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905
|||||||||||||||| ||| ||||| || ||| |||||
Sbjct 1806782 CAACATCCAGAAGGAGAGCACCCTGCACCTCGTGCTGCGC 1806821
>seq5
Length=10013798
Score = 138 bits (152), Expect = 1e-27
Identities = 163/221 (74%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 40697 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCG 40756
|| |||| || || ||||||||||| ||||||||| |||| || || | | ||||
Sbjct 3224208 TAGTCGTCAAGACACTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACGA 3224267
Query 40757 TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGAC 40816
| | | ||||| || |||| ||||| ||||||||||| | ||||| || || |
Sbjct 3224268 TCGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAACAGCGCC 3224327
Query 40817 TCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGA 40876
|||||| || ||||| ||||| || |||| || ||||| | |||||||||||||||||
Sbjct 3224328 TCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTGAGCGACTACAACATCCAGA 3224387
Query 40877 AGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||| | ||||| || || || | || || | ||||||
Sbjct 3224388 AGGAGTCGACGCTCCACCTCGTCCTTCGTCTGCGTGGCGGC 3224428
Score = 138 bits (152), Expect = 1e-27
Identities = 156/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || |||||||| || || ||||||||| |||| || || | |
Sbjct 3224429 ATGCAAATCTTTGTCAAGACGCTCACTGGAAAGACCATCACCCTCGAGGTGGAGTCGTCG 3224488
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | ||| || || | ||||| ||||||||||| | ||||||
Sbjct 3224489 GACACAATCGATAATGTTAAGTCGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 3224548
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||||| ||||||| || ||||| ||||| || |||| || ||||| | ||||||||||
Sbjct 3224549 CAACGCCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTGAGCGACTACAAC 3224608
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||| | ||||| || || ||
Sbjct 3224609 ATCCAGAAGGAGTCGACGCTCCACCTCGT 3224637
Score = 131 bits (144), Expect = 2e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || ||| | || ||||| || ||||| | || || ||| | |
Sbjct 3224657 ATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACGATCACGTTGGAGGTGGAATCGTCG 3224716
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| | ||| || |||| ||||| ||||||||||| | |||||
Sbjct 3224717 GACACAATCGACAACG-TAAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCA 3224775
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || || | ||| ||||| ||||| || |||| || ||| | | |||||||||
Sbjct 3224776 GCAGCGCCTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCTTGAGCGACTACAA 3224835
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||||| ||| || ||||| || ||||| || | ||||||
Sbjct 3224836 CATCCAGAAGGAGAGCACTCTACATCTTGTACTGCGCCTGCGCGGCGGC 3224884
Score = 102 bits (112), Expect = 8e-17
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGG 40771
|||||||||| |||||||| | || ||||| | | |||| | | | |||||
Sbjct 3223931 TCACGGGCAAGACCATCACGCTTGAGGTCGAGTCGTCGGACACGATCGACAATGTCAAGT 3223990
Query 40772 AAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCA 40831
|| || | ||||| ||||||||||| | |||||||| || || || | ||| ||||
Sbjct 3223991 CGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCCTGATTTTCGCCGGCA 3224050
Query 40832 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGC 40891
| ||||| || || | || ||| | ||| |||||||||||||||||| | ||||| |
Sbjct 3224051 AGCAGCTCGAGGATGGCCGGACCTTGTCCGATTACAACATCCAGAAGGAGTCGACGCTCC 3224110
Query 40892 ATCTAGTGTTGCGCTTGAGGGGCGGC 40917
| || || | ||| | | ||||||
Sbjct 3224111 ACCTCGTCCTCCGCCTTCGTGGCGGC 3224136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515218716982000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |