Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq2 178 1e-39 seq11 156 4e-33 seq5 138 1e-27 >seq2 Length=5461500 Score = 178 bits (196), Expect = 1e-39 Identities = 316/456 (69%), Gaps = 14/456 (3%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 ||||||| || ||||| ||||| |||||| | || ||| || | |||| | | | | Sbjct 1981732 AGAAGGCTGATTGGGCCCTGCGTTGGATCCAAGACAAGGAGTCCACGTTCGCCCAAAGAC 1981791 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | || ||||| || |||||||| ||| ||||||| || ||||||| | || || | Sbjct 1981792 TTGTTGCCTTTGCCGCCGTCGAAGGCATCTTCTTCAGCGGTGCTTTCGCCTCAATCTTCT 1981851 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||| ||||| ||||| |||||||| || ||||| ||| ||||||||||||||| | | Sbjct 1981852 GGCTGAAGAAGCGCGGTCTCATGCCTGGTCTGACATTCTCCAACGAGCTCATCTCGCGTG 1981911 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTG--GTGCAGCGACC 117219 | |||||||| || ||| ||||| || ||||| ||||| | || | ||| Sbjct 1981912 ATGAGGGTCTTCACACCGATTTTGCGTG---CCTGTT---GCATTCGCACCTCAACAACC 1981965 Query 117220 G----AGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCT 117275 | ||| | | | ||| || ||| |||||||||| ||| |||| |||||| | Sbjct 1981966 GGGCCAGCAAGAAGGTCATCAACGACATCATCACCGACGCCGTCACCATTGAGCAGGAGT 1982025 Query 117276 TCCTCACCGAAGCGCTGCC-GGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAA 117334 |||||||||| || || || |||| |||||| || | ||| | |||| ||| Sbjct 1982026 TCCTCACCGAGGCCCTCCCATGTGC-TCTGCTCGGCATGAATGCCACCTTGATGAAGCAG 1982084 Query 117335 TACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAAC 117394 |||||||||||||| ||||| | || || | | || | | || ||| ||||| Sbjct 1982085 TACATCGAGTTCGTTGCCGATCGTCTCCTTGTTGCTCTCGGCAACGAGAAGGTGTACAAA 1982144 Query 117395 ACGCCCAACCCGCTGGACTTTATGAACCTCATCTCC 117430 || | ||||| | ||||| ||| | ||||||| Sbjct 1982145 TCGTCGAACCCCTTCGACTTCATGGAGAACATCTCC 1982180 Score = 170 bits (188), Expect = 2e-37 Identities = 209/285 (73%), Gaps = 3/285 (1%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| |||||||||||||| |||||||| | ||| ||| | || || Sbjct 1981312 ATCTGGCAAATGTACAAGAAGGCCGAGGCGTCCTTCTGGACGGCCGAAGAGATCGATCTT 1981371 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| | ||||||| | || ||||| ||| | ||||| ||||| || | Sbjct 1981372 TCCAAGGATTTGCACGACTGGAACAACCGTTTGAATGACGATGAGCGGTATTTCGTCTCG 1981431 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||| | || || || |||||||| ||||| |||||||||||||| || ||||| ||| Sbjct 1981432 CACATTCTCGCTTTCTTCGCCGCTTCGGACGGAATCGTCAACGAGAACCTTGTCGAACGT 1981491 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| |||||||| | ||||||| || ||||||||||| || || ||| ||| Sbjct 1981492 TTCAGCGGCGAGGTGCAAATCCCCGAGGCTCGCTGCTTCTACGGTTTCCAAATCATGATG 1981551 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 || || | ||||| || | || ||| | | |||||| ||||| Sbjct 1981552 GAAAATATCCACTCCGAGACCTACTCGCTCTTGATCGACTCGTAC 1981596 >seq11 Length=1832425 Score = 156 bits (172), Expect = 4e-33 Identities = 168/220 (76%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || |||||||| || || |||||| | || || || | Sbjct 1806603 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 1806662 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 |||||| | | | |||| ||||| || || | ||||| |||||||||||| | || Sbjct 1806663 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 1806721 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||| || || ||||||| ||| ||||| ||||| || || | |||||||| | |||||| Sbjct 1806722 CCAACAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACCCTGAGCGACTA 1806781 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 |||||||||||||||| ||| ||||| || ||| ||||| Sbjct 1806782 CAACATCCAGAAGGAGAGCACCCTGCACCTCGTGCTGCGC 1806821 >seq5 Length=10013798 Score = 138 bits (152), Expect = 1e-27 Identities = 163/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 40697 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCG 40756 || |||| || || ||||||||||| ||||||||| |||| || || | | |||| Sbjct 3224208 TAGTCGTCAAGACACTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACGA 3224267 Query 40757 TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGAC 40816 | | | ||||| || |||| ||||| ||||||||||| | ||||| || || | Sbjct 3224268 TCGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAACAGCGCC 3224327 Query 40817 TCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGA 40876 |||||| || ||||| ||||| || |||| || ||||| | ||||||||||||||||| Sbjct 3224328 TCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTGAGCGACTACAACATCCAGA 3224387 Query 40877 AGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||| | ||||| || || || | || || | |||||| Sbjct 3224388 AGGAGTCGACGCTCCACCTCGTCCTTCGTCTGCGTGGCGGC 3224428 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || |||||||| || || ||||||||| |||| || || | | Sbjct 3224429 ATGCAAATCTTTGTCAAGACGCTCACTGGAAAGACCATCACCCTCGAGGTGGAGTCGTCG 3224488 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||| || || | ||||| ||||||||||| | |||||| Sbjct 3224489 GACACAATCGATAATGTTAAGTCGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 3224548 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| ||||||| || ||||| ||||| || |||| || ||||| | |||||||||| Sbjct 3224549 CAACGCCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTGAGCGACTACAAC 3224608 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | ||||| || || || Sbjct 3224609 ATCCAGAAGGAGTCGACGCTCCACCTCGT 3224637 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||| | || ||||| || ||||| | || || ||| | | Sbjct 3224657 ATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACGATCACGTTGGAGGTGGAATCGTCG 3224716 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || |||| ||||| ||||||||||| | ||||| Sbjct 3224717 GACACAATCGACAACG-TAAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCA 3224775 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | ||| ||||| ||||| || |||| || ||| | | ||||||||| Sbjct 3224776 GCAGCGCCTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCTTGAGCGACTACAA 3224835 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| ||| || ||||| || ||||| || | |||||| Sbjct 3224836 CATCCAGAAGGAGAGCACTCTACATCTTGTACTGCGCCTGCGCGGCGGC 3224884 Score = 102 bits (112), Expect = 8e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGG 40771 |||||||||| |||||||| | || ||||| | | |||| | | | ||||| Sbjct 3223931 TCACGGGCAAGACCATCACGCTTGAGGTCGAGTCGTCGGACACGATCGACAATGTCAAGT 3223990 Query 40772 AAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCA 40831 || || | ||||| ||||||||||| | |||||||| || || || | ||| |||| Sbjct 3223991 CGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCCTGATTTTCGCCGGCA 3224050 Query 40832 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGC 40891 | ||||| || || | || ||| | ||| |||||||||||||||||| | ||||| | Sbjct 3224051 AGCAGCTCGAGGATGGCCGGACCTTGTCCGATTACAACATCCAGAAGGAGTCGACGCTCC 3224110 Query 40892 ATCTAGTGTTGCGCTTGAGGGGCGGC 40917 | || || | ||| | | |||||| Sbjct 3224111 ACCTCGTCCTCCGCCTTCGTGGCGGC 3224136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218716982000