Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq11 116 3e-21
seq5 113 4e-20
>seq11
Length=1832425
Score = 116 bits (128), Expect = 3e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606
||| || || |||||||| ||||||| ||||| ||| |||||||| || || ||| |
Sbjct 1806797 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAA 1806738
Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666
|||||| ||||| || ||||| || |||||||||||||| || || || || |
Sbjct 1806737 GATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 1806678
Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726
|||| |||||| | ||| ||||| | ||| | ||| || || || || || || ||
Sbjct 1806677 GTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGAC 1806618
Query 118727 AAAAATCTGCAT 118738
|||||||||||
Sbjct 1806617 GAAAATCTGCAT 1806606
>seq5
Length=10013798
Score = 113 bits (124), Expect = 4e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || || |||||||| ||||||| || || |||||||||||
Sbjct 3224404 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCCTCGAGCTG 3224345
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || || ||||||| ||||| || |||||||| |||||||||||||| ||| ||
Sbjct 3224344 CTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTT 3224285
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| ||||||| ||| ||||||| ||| | || ||||| ||
Sbjct 3224284 CGACTTGACATTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGT 3224225
Query 118715 CAGAGTTTTTAC 118726
|| || || ||
Sbjct 3224224 GAGTGTCTTGAC 3224213
Score = 113 bits (124), Expect = 4e-20
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || || |||||||| ||||||| || || |||||||||||
Sbjct 3224632 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCCTCGAGCTG 3224573
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || || ||||||| || ||||| || || || |||||||||||||| || ||
Sbjct 3224572 CTTGCCGGCAAAGATGAGGCGTTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTT 3224513
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
||||| | |||| ||||||| ||| ||||||| ||| | || || || ||
Sbjct 3224512 CGACTTAACATTATCGATTGTGTCCGACGACTCCACCTCGAGGGTGATGGTCTTTCCAGT 3224453
Query 118715 CAGAGTTTTTACAAAAATCTGCATG 118739
|| || || ||||| || ||||||
Sbjct 3224452 GAGCGTCTTGACAAAGATTTGCATG 3224428
Score = 109 bits (120), Expect = 5e-19
Identities = 140/193 (73%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606
||| || || |||||||| ||||||| || || ||||||||||| || || ||| |
Sbjct 3224848 CTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 3224789
Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666
|| || |||||||| ||||| || |||||||||||||| ||| || || || |
Sbjct 3224788 AATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTGCTCTTTACGTT 3224729
Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726
|||| ||||||| || ||||| | || | ||| |||||||||| || || ||
Sbjct 3224728 GTCGATTGTGTCCGACGATTCCACCTCCAACGTGATCGTCTTGCCGGTCAACGTCTTGAC 3224669
Query 118727 AAAAATCTGCATG 118739
|| |||||||||
Sbjct 3224668 GAAGATCTGCATG 3224656
Score = 100 bits (110), Expect = 2e-16
Identities = 130/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || || |||||||||||| || || || ||||||||||||
Sbjct 3224112 GTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGACAAGGTCCGGCCATCCTCGAGCTG 3224053
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || ||| | || || |||||||| |||||||| |||||||||||||| || ||
Sbjct 3224052 CTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTT 3223993
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| ||||||| ||||||||| | || | || ||||| ||
Sbjct 3223992 CGACTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGCGTGATGGTCTTGCCCGT 3223933
Score = 95.1 bits (104), Expect = 1e-14
Identities = 88/112 (79%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 133222 GGTTGACCACTTGAAACTCGCCGGCGAGAACGCGTCTGAGATATACATTCGACGTGAACG 133281
|||||||||| || |||||||||||||| ||||| | | || | || |||||| |||
Sbjct 2424722 GGTTGACCACCTGGAACTCGCCGGCGAGGACGCGGCGCTGGTAGATGTTGGACGTGTACG 2424781
Query 133282 GTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCAT 133333
| ||||| | ||||||||||| || ||||||| ||| | ||||| |||||
Sbjct 2424782 GCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGACGTGCTGGCCGTCGGCAT 2424833
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433830003451900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |