Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq11 116 3e-21 seq5 113 4e-20 >seq11 Length=1832425 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || |||||||| ||||||| ||||| ||| |||||||| || || ||| | Sbjct 1806797 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAA 1806738 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 |||||| ||||| || ||||| || |||||||||||||| || || || || | Sbjct 1806737 GATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 1806678 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| |||||| | ||| ||||| | ||| | ||| || || || || || || || Sbjct 1806677 GTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGAC 1806618 Query 118727 AAAAATCTGCAT 118738 ||||||||||| Sbjct 1806617 GAAAATCTGCAT 1806606 >seq5 Length=10013798 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| ||||||| || || ||||||||||| Sbjct 3224404 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCCTCGAGCTG 3224345 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || || ||||||| ||||| || |||||||| |||||||||||||| ||| || Sbjct 3224344 CTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTT 3224285 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| ||||||| ||| ||||||| ||| | || ||||| || Sbjct 3224284 CGACTTGACATTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGT 3224225 Query 118715 CAGAGTTTTTAC 118726 || || || || Sbjct 3224224 GAGTGTCTTGAC 3224213 Score = 113 bits (124), Expect = 4e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| ||||||| || || ||||||||||| Sbjct 3224632 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCCTCGAGCTG 3224573 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || || ||||||| || ||||| || || || |||||||||||||| || || Sbjct 3224572 CTTGCCGGCAAAGATGAGGCGTTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTT 3224513 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 ||||| | |||| ||||||| ||| ||||||| ||| | || || || || Sbjct 3224512 CGACTTAACATTATCGATTGTGTCCGACGACTCCACCTCGAGGGTGATGGTCTTTCCAGT 3224453 Query 118715 CAGAGTTTTTACAAAAATCTGCATG 118739 || || || ||||| || |||||| Sbjct 3224452 GAGCGTCTTGACAAAGATTTGCATG 3224428 Score = 109 bits (120), Expect = 5e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || |||||||| ||||||| || || ||||||||||| || || ||| | Sbjct 3224848 CTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 3224789 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 || || |||||||| ||||| || |||||||||||||| ||| || || || | Sbjct 3224788 AATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTGCTCTTTACGTT 3224729 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||||||| || ||||| | || | ||| |||||||||| || || || Sbjct 3224728 GTCGATTGTGTCCGACGATTCCACCTCCAACGTGATCGTCTTGCCGGTCAACGTCTTGAC 3224669 Query 118727 AAAAATCTGCATG 118739 || ||||||||| Sbjct 3224668 GAAGATCTGCATG 3224656 Score = 100 bits (110), Expect = 2e-16 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||||||| || || || |||||||||||| Sbjct 3224112 GTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGACAAGGTCCGGCCATCCTCGAGCTG 3224053 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| | || || |||||||| |||||||| |||||||||||||| || || Sbjct 3224052 CTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTT 3223993 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| ||||||| ||||||||| | || | || ||||| || Sbjct 3223992 CGACTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGCGTGATGGTCTTGCCCGT 3223933 Score = 95.1 bits (104), Expect = 1e-14 Identities = 88/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 133222 GGTTGACCACTTGAAACTCGCCGGCGAGAACGCGTCTGAGATATACATTCGACGTGAACG 133281 |||||||||| || |||||||||||||| ||||| | | || | || |||||| ||| Sbjct 2424722 GGTTGACCACCTGGAACTCGCCGGCGAGGACGCGGCGCTGGTAGATGTTGGACGTGTACG 2424781 Query 133282 GTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCAT 133333 | ||||| | ||||||||||| || ||||||| ||| | ||||| ||||| Sbjct 2424782 GCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGACGTGCTGGCCGTCGGCAT 2424833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830003451900