Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq5 212 1e-49 >seq5 Length=10013798 Score = 212 bits (234), Expect = 1e-49 Identities = 611/924 (66%), Gaps = 26/924 (3%) Strand=Plus/Minus Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | | ||||| ||||| || || ||| ||| || |||||||| | | |||||| Sbjct 2426213 TACCAGTACTTTGGCTTCAAGACTCTCGAGCGATCCTACCTCCTCAAGCTCAACGGCAAG 2426154 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 ||||| || ||| ||||||||| | ||||| ||| | ||||| || || || Sbjct 2426153 ATCGTCGAGCGACCGCAGCACATGATCATGCGCGTGTCGGTCGGCATCTGGGGCGACAAC 2426094 Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGA-GTGAACGCTGGATGACACATGCCAC 248996 || ||| |||| |||||||||||| ||| | | | | || | || || ||| | Sbjct 2426093 ATCGAGCGCGTCATCGAGACGTACAATCTCATGTCGAGCAAGATGT-TCACGCACGCCTC 2426035 Query 248997 ACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGC 249056 |||||||||||||||||||| || | |||||| |||||||| || | | Sbjct 2426034 GCCGACGCTCTTCAACGCCGGCACGCCGCAGGCGCAGCTGTCGTCGTGCTTCCTCGTCGA 2425975 Query 249057 CATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGAT 249113 |||| | |||||| |||| ||||| || |||||||| || |||| || | ||| Sbjct 2425974 CATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTCAA---GACGTGCGCCATGAT 2425918 Query 249114 TTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTA 249173 || || | || ||||| ||||| ||| | || | |||||| || | || || || Sbjct 2425917 CTCCAAGATGGCCGGCGGCATCGGCCTCAACATCCACCGCATCCGCGCCACCGGATCCTA 2425858 Query 249174 CATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTC 249233 ||| || || || || | | || ||| ||| | ||||| ||| | Sbjct 2425857 CATTGCCGGCACCAACGGTACCTCCAACGGCATCACGCCCATGCTTCGCGTCTTCAACAA 2425798 Query 249234 CACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTT 249290 ||| ||| ||| | || |||||| ||| | || ||| | |||||||| || | Sbjct 2425797 CACGGCCCGGTACGTCGACCAGGGCGGCAACAAGCGGCCGGGCGCCTTCGCCATCTACCT 2425738 Query 249291 GGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGA 249350 |||| |||||||||||| | || ||||| || ||| || |||||| ||||||| || Sbjct 2425737 GGAACCGTGGCACGCCGACGTTTTTGAGTTTCTCGACCTGCGCAAGAACCACGGCAAGGA 2425678 Query 249351 GCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCG 249410 | || | ||||| ||||| ||| || || ||| || ||||| | |||||| || Sbjct 2425677 GGAGGTGCGCGCGCGCGACCTGTTCCTCGCGCTCTGGATCCCCGACCTCTTCATGAAGCG 2425618 Query 249411 CGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGA-CGCCCCGGACCTCATCG 249469 |||| || ||||||| |||||||| | | || ||| ||||||| |||| || Sbjct 2425617 CGTCGAGAAGAACGGCGACTGGACGCTCATGTGCCCCAACGAGTGCCCCGG-CCTCGCCG 2425559 Query 249470 ATCTAC-ACGGCGCCGACTTCGACCAAGC-CTATAAGAAA--TACGAATCCAACGGCATC 249525 | || | |||||| ||| |||| | || || || |||| ||||| | | ||| | Sbjct 2425558 A-CTGCTACGGCGACGAGTTCG---AGGCGCTGTACGAAAAGTACGAGCGCGAGGGCCGC 2425503 Query 249526 G---GCAAGACAATCAAGGCTCGGACCCTTTTTGCGAAGGTGGTGGAGTCCCAGATAGAG 249582 | ||||||| || || | || || | | | | ||| |||||| ||| Sbjct 2425502 GGCCGCAAGACGGTCCGCGCCCAGAAGCTCTGGTACTCGATCCTCGAGGCCCAGACGGAG 2425443 Query 249583 ACAGGGGGGCCGTATTAT-TTGTTCAAAGACGCGTGCAACGCCAAGAGTAACCAACGGCA 249641 || ||| || | || ||| ||| |||||||||||| |||||| ||||| | | Sbjct 2425442 AC-GGGCAACCCCTTCATGCTGTACAAGGACGCGTGCAACCGCAAGAGCAACCAGAAGAA 2425384 Query 249642 TCTTGGTACCATCCGCTCGTCAAATCTCTGTGCAGAGGTGATTCAATACTCGTCCAAGGA 249701 || || || |||||| || || || || | ||| | || | |||||| | || Sbjct 2425383 CCTCGGGACGATCCGCAGCTCCAACCTGTGCACCGAGATCATCGAGTACTCGGCGCCCGA 2425324 Query 249702 GGAGATTGCCGTCTGCAACCTGGC 249725 ||| | |||||||||||||| || Sbjct 2425323 CGAGGTGGCCGTCTGCAACCTCGC 2425300 Score = 118 bits (130), Expect = 2e-21 Identities = 266/399 (67%), Gaps = 22/399 (6%) Strand=Plus/Plus Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060 |||||||| |||| ||| |||| || ||||| || ||||| ||||| ||||| || || Sbjct 1768796 CTTCCTCACATGCTCTTCTACGGCCCCCCCGGCACTGGCAAAACGTCCACCATTCTCGCT 1768855 Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCT 254120 || ||| | |||| ||| | || |||| || || ||||||||||| || Sbjct 1768856 CTCGCCAAAGAACTGTACGGCCCCGAGATGATGAAGTCCCGAGTTCTCGAGCTGAATGCC 1768915 Query 254121 TCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGA-CTTT------------ 254167 || ||||| || || | | | |||||||| ||| |||||| |||| Sbjct 1768916 TCCGACGAGCGGGGTATATCCATTGTCCGCGAAAAGGTCAAGAACTTTGCACGCATGCAG 1768975 Query 254168 CT--CCAAGATGTCGATTTCGTCGTTCCAA-----CCCGGCTGTCCGCCTTTCAAGCTCG 254220 || |||| | | ||| | | || |||| |||||||| |||||| || Sbjct 1768976 CTGACCAACCCGCCCGCGTCGACTCTGAAAAAATACCCG--TGTCCGCCCTTCAAGATCA 1769033 Query 254221 TGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGA 254280 | ||||| ||||| || || ||||||| || || ||| |||| | || || || | Sbjct 1769034 TCATCCTTGACGAAGCCGATTCCATGACACAAGATGCCCAGAGCGCCTTGCGTCGCACAA 1769093 Query 254281 TGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCA 254340 |||| || || | | || || |||||| || | |||||||||||| | |||| Sbjct 1769094 TGGAAACCTACAGCAAAATCACCCGCTTTTGCTTGATCTGCAACTACGTGACCCGTATCA 1769153 Query 254341 TCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 ||| ||||||||| ||| ||| |||||| ||||||| Sbjct 1769154 TCGACCCGCTGGCCAGTCGATGCAGCAAGTTCCGATTCA 1769192 Score = 87.8 bits (96), Expect = 4e-12 Identities = 265/406 (65%), Gaps = 20/406 (5%) Strand=Plus/Plus Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060 ||||| || |||| || |||| || || || || ||||||||||| || || |||||| Sbjct 2147225 CTTCCCCACCTGCTCCTCTACGGACCGCCGGGTACGGGCAAGACGTCGACGATTCTGGCG 2147284 Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCT 254120 || || || | | | |||| | ||| | | || ||||| ||||| ||||| Sbjct 2147285 CTCGCGCGGCGCATCTACGGCGCCGCCAACGTCCGGCAGATGGTGCTGGAGCTCAACGCC 2147344 Query 254121 TCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTC---CAAGATG 254177 || ||||| ||||| | ||||| || || || |||||||||| ||| | || | | Sbjct 2147345 TCGGACGACCGCGGCATCGACGTGGTGCGGGAGCAGATCAAGACGTTCGCCAGCACCAAG 2147404 Query 254178 TCGAT-TTC-------GTCGTTC--CAACCCG------GCTGTCCGCCTTTCAAGCTCGT 254221 ||| ||| || ||| ||| | | || ||| | ||||||||| | Sbjct 2147405 CAGATCTTCTCCATGGGTGCTTCGGCAAAGGGGAATTCGATGGCCGGC-TTCAAGCTCAT 2147463 Query 254222 GATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGAT 254281 |||||||||||||||||| ||||||| | |||||| || ||||| || | || Sbjct 2147464 CATCCTGGACGAGGCGGACGCCATGACCAACACGGCGCAGATGGCGCTCCGGCGGATCAT 2147523 Query 254282 GGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCAT 254341 ||| | | || | || ||| | || ||| | | |||||||| | ||| | | Sbjct 2147524 GGAAAAGTACACGGTCAACACGAGATTCTGCATCATCGCCAACTACGCGCACAAGCTGAG 2147583 Query 254342 CGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCAGCACCCTC 254387 | || ||||| || || ||| | || || |||||| | ||| Sbjct 2147584 CCCCGCGCTGCTGTCCCGCTGCACGCGCTTCCGGTTCAGCCCGCTC 2147629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073765368177600