Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq5 212 1e-49
>seq5
Length=10013798
Score = 212 bits (234), Expect = 1e-49
Identities = 611/924 (66%), Gaps = 26/924 (3%)
Strand=Plus/Minus
Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877
||| | | ||||| ||||| || || ||| ||| || |||||||| | | ||||||
Sbjct 2426213 TACCAGTACTTTGGCTTCAAGACTCTCGAGCGATCCTACCTCCTCAAGCTCAACGGCAAG 2426154
Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937
||||| || ||| ||||||||| | ||||| ||| | ||||| || || ||
Sbjct 2426153 ATCGTCGAGCGACCGCAGCACATGATCATGCGCGTGTCGGTCGGCATCTGGGGCGACAAC 2426094
Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGA-GTGAACGCTGGATGACACATGCCAC 248996
|| ||| |||| |||||||||||| ||| | | | | || | || || ||| |
Sbjct 2426093 ATCGAGCGCGTCATCGAGACGTACAATCTCATGTCGAGCAAGATGT-TCACGCACGCCTC 2426035
Query 248997 ACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGC 249056
|||||||||||||||||||| || | |||||| |||||||| || | |
Sbjct 2426034 GCCGACGCTCTTCAACGCCGGCACGCCGCAGGCGCAGCTGTCGTCGTGCTTCCTCGTCGA 2425975
Query 249057 CATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGAT 249113
|||| | |||||| |||| ||||| || |||||||| || |||| || | |||
Sbjct 2425974 CATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTCAA---GACGTGCGCCATGAT 2425918
Query 249114 TTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTA 249173
|| || | || ||||| ||||| ||| | || | |||||| || | || || ||
Sbjct 2425917 CTCCAAGATGGCCGGCGGCATCGGCCTCAACATCCACCGCATCCGCGCCACCGGATCCTA 2425858
Query 249174 CATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTC 249233
||| || || || || | | || ||| ||| | ||||| ||| |
Sbjct 2425857 CATTGCCGGCACCAACGGTACCTCCAACGGCATCACGCCCATGCTTCGCGTCTTCAACAA 2425798
Query 249234 CACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTT 249290
||| ||| ||| | || |||||| ||| | || ||| | |||||||| || |
Sbjct 2425797 CACGGCCCGGTACGTCGACCAGGGCGGCAACAAGCGGCCGGGCGCCTTCGCCATCTACCT 2425738
Query 249291 GGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGA 249350
|||| |||||||||||| | || ||||| || ||| || |||||| ||||||| ||
Sbjct 2425737 GGAACCGTGGCACGCCGACGTTTTTGAGTTTCTCGACCTGCGCAAGAACCACGGCAAGGA 2425678
Query 249351 GCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCG 249410
| || | ||||| ||||| ||| || || ||| || ||||| | |||||| ||
Sbjct 2425677 GGAGGTGCGCGCGCGCGACCTGTTCCTCGCGCTCTGGATCCCCGACCTCTTCATGAAGCG 2425618
Query 249411 CGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGA-CGCCCCGGACCTCATCG 249469
|||| || ||||||| |||||||| | | || ||| ||||||| |||| ||
Sbjct 2425617 CGTCGAGAAGAACGGCGACTGGACGCTCATGTGCCCCAACGAGTGCCCCGG-CCTCGCCG 2425559
Query 249470 ATCTAC-ACGGCGCCGACTTCGACCAAGC-CTATAAGAAA--TACGAATCCAACGGCATC 249525
| || | |||||| ||| |||| | || || || |||| ||||| | | ||| |
Sbjct 2425558 A-CTGCTACGGCGACGAGTTCG---AGGCGCTGTACGAAAAGTACGAGCGCGAGGGCCGC 2425503
Query 249526 G---GCAAGACAATCAAGGCTCGGACCCTTTTTGCGAAGGTGGTGGAGTCCCAGATAGAG 249582
| ||||||| || || | || || | | | | ||| |||||| |||
Sbjct 2425502 GGCCGCAAGACGGTCCGCGCCCAGAAGCTCTGGTACTCGATCCTCGAGGCCCAGACGGAG 2425443
Query 249583 ACAGGGGGGCCGTATTAT-TTGTTCAAAGACGCGTGCAACGCCAAGAGTAACCAACGGCA 249641
|| ||| || | || ||| ||| |||||||||||| |||||| ||||| | |
Sbjct 2425442 AC-GGGCAACCCCTTCATGCTGTACAAGGACGCGTGCAACCGCAAGAGCAACCAGAAGAA 2425384
Query 249642 TCTTGGTACCATCCGCTCGTCAAATCTCTGTGCAGAGGTGATTCAATACTCGTCCAAGGA 249701
|| || || |||||| || || || || | ||| | || | |||||| | ||
Sbjct 2425383 CCTCGGGACGATCCGCAGCTCCAACCTGTGCACCGAGATCATCGAGTACTCGGCGCCCGA 2425324
Query 249702 GGAGATTGCCGTCTGCAACCTGGC 249725
||| | |||||||||||||| ||
Sbjct 2425323 CGAGGTGGCCGTCTGCAACCTCGC 2425300
Score = 118 bits (130), Expect = 2e-21
Identities = 266/399 (67%), Gaps = 22/399 (6%)
Strand=Plus/Plus
Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060
|||||||| |||| ||| |||| || ||||| || ||||| ||||| ||||| || ||
Sbjct 1768796 CTTCCTCACATGCTCTTCTACGGCCCCCCCGGCACTGGCAAAACGTCCACCATTCTCGCT 1768855
Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCT 254120
|| ||| | |||| ||| | || |||| || || ||||||||||| ||
Sbjct 1768856 CTCGCCAAAGAACTGTACGGCCCCGAGATGATGAAGTCCCGAGTTCTCGAGCTGAATGCC 1768915
Query 254121 TCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGA-CTTT------------ 254167
|| ||||| || || | | | |||||||| ||| |||||| ||||
Sbjct 1768916 TCCGACGAGCGGGGTATATCCATTGTCCGCGAAAAGGTCAAGAACTTTGCACGCATGCAG 1768975
Query 254168 CT--CCAAGATGTCGATTTCGTCGTTCCAA-----CCCGGCTGTCCGCCTTTCAAGCTCG 254220
|| |||| | | ||| | | || |||| |||||||| |||||| ||
Sbjct 1768976 CTGACCAACCCGCCCGCGTCGACTCTGAAAAAATACCCG--TGTCCGCCCTTCAAGATCA 1769033
Query 254221 TGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGA 254280
| ||||| ||||| || || ||||||| || || ||| |||| | || || || |
Sbjct 1769034 TCATCCTTGACGAAGCCGATTCCATGACACAAGATGCCCAGAGCGCCTTGCGTCGCACAA 1769093
Query 254281 TGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCA 254340
|||| || || | | || || |||||| || | |||||||||||| | ||||
Sbjct 1769094 TGGAAACCTACAGCAAAATCACCCGCTTTTGCTTGATCTGCAACTACGTGACCCGTATCA 1769153
Query 254341 TCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379
||| ||||||||| ||| ||| |||||| |||||||
Sbjct 1769154 TCGACCCGCTGGCCAGTCGATGCAGCAAGTTCCGATTCA 1769192
Score = 87.8 bits (96), Expect = 4e-12
Identities = 265/406 (65%), Gaps = 20/406 (5%)
Strand=Plus/Plus
Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060
||||| || |||| || |||| || || || || ||||||||||| || || ||||||
Sbjct 2147225 CTTCCCCACCTGCTCCTCTACGGACCGCCGGGTACGGGCAAGACGTCGACGATTCTGGCG 2147284
Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCT 254120
|| || || | | | |||| | ||| | | || ||||| ||||| |||||
Sbjct 2147285 CTCGCGCGGCGCATCTACGGCGCCGCCAACGTCCGGCAGATGGTGCTGGAGCTCAACGCC 2147344
Query 254121 TCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTC---CAAGATG 254177
|| ||||| ||||| | ||||| || || || |||||||||| ||| | || | |
Sbjct 2147345 TCGGACGACCGCGGCATCGACGTGGTGCGGGAGCAGATCAAGACGTTCGCCAGCACCAAG 2147404
Query 254178 TCGAT-TTC-------GTCGTTC--CAACCCG------GCTGTCCGCCTTTCAAGCTCGT 254221
||| ||| || ||| ||| | | || ||| | ||||||||| |
Sbjct 2147405 CAGATCTTCTCCATGGGTGCTTCGGCAAAGGGGAATTCGATGGCCGGC-TTCAAGCTCAT 2147463
Query 254222 GATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGAT 254281
|||||||||||||||||| ||||||| | |||||| || ||||| || | ||
Sbjct 2147464 CATCCTGGACGAGGCGGACGCCATGACCAACACGGCGCAGATGGCGCTCCGGCGGATCAT 2147523
Query 254282 GGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCAT 254341
||| | | || | || ||| | || ||| | | |||||||| | ||| | |
Sbjct 2147524 GGAAAAGTACACGGTCAACACGAGATTCTGCATCATCGCCAACTACGCGCACAAGCTGAG 2147583
Query 254342 CGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCAGCACCCTC 254387
| || ||||| || || ||| | || || |||||| | |||
Sbjct 2147584 CCCCGCGCTGCTGTCCCGCTGCACGCGCTTCCGGTTCAGCCCGCTC 2147629
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073765368177600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |