Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq11 138 9e-28
seq5 122 7e-23
>seq11
Length=1832425
Score = 138 bits (152), Expect = 9e-28
Identities = 157/211 (74%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
|||||| |||||||||||||| |||||||||||| |||| ||| | || || || ||
Sbjct 1806809 GTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCGAGCTG 1806750
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| |||||||| || | |||||||||||||| || | |||||||||||| || ||
Sbjct 1806749 CTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTT 1806690
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | | |||| | ||||||||| | ||| |||||||| |||||
Sbjct 1806689 GGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGT 1806630
Query 45313 CAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343
|| ||||| || || || ||||| ||||||
Sbjct 1806629 GAGGGTCTTGACGAAAATCTGCATCTTGCCT 1806599
>seq5
Length=10013798
Score = 122 bits (134), Expect = 7e-23
Identities = 153/209 (73%), Gaps = 1/209 (0%)
Strand=Plus/Minus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| || || |||||||||||||| |||||||||||| ||| || |||| || |
Sbjct 3224864 CAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCGTCCTCGA 3224805
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
| || || |||||||| |||| ||||| |||||||| || | |||||||||||| ||
Sbjct 3224804 GCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAA 3224745
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
| || ||| || | | ||||| |||||||||| || ||||||||||
Sbjct 3224744 TCTTGCTCTTTACGTTGTCGATTGTGTCCGACGATTCCACCTCCAACGTGATCGTCTTGC 3224685
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATG 45337
| |||| ||||| || ||||| ||||||
Sbjct 3224684 CGGTCAACGTCTTGACGAAGATCTGCATG 3224656
Score = 113 bits (124), Expect = 4e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| ||||| ||||||||| |||||||||||| |||| || |||| || || ||
Sbjct 3224404 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCCTCGAGCTG 3224345
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| ||||| || || | ||||||||||||||||| | |||||||||||| ||| ||
Sbjct 3224344 CTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTT 3224285
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | ||||| | ||||||||| | ||| || |||||||||||
Sbjct 3224284 CGACTTGACATTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGT 3224225
Query 45313 CAGAGTCTTCAC 45324
|| ||||| ||
Sbjct 3224224 GAGTGTCTTGAC 3224213
Score = 104 bits (114), Expect = 2e-17
Identities = 146/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| ||||| ||||||||| |||||||||||| |||| || |||| || || ||
Sbjct 3224632 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCCTCGAGCTG 3224573
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| ||||| || || | || || ||||| || || | |||||||||||| || ||
Sbjct 3224572 CTTGCCGGCAAAGATGAGGCGTTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTT 3224513
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
|||||| | | ||||| ||||||||| | ||| || ||||| || ||
Sbjct 3224512 CGACTTAACATTATCGATTGTGTCCGACGACTCCACCTCGAGGGTGATGGTCTTTCCAGT 3224453
Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337
|| ||||| |||||||||||||||
Sbjct 3224452 GAGCGTCTTGACAAAGATTTGCATG 3224428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395074838876575
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |