Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq11 138 9e-28 seq5 122 7e-23 >seq11 Length=1832425 Score = 138 bits (152), Expect = 9e-28 Identities = 157/211 (74%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 |||||| |||||||||||||| |||||||||||| |||| ||| | || || || || Sbjct 1806809 GTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCGAGCTG 1806750 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| || | |||||||||||||| || | |||||||||||| || || Sbjct 1806749 CTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTT 1806690 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | ||||||||| | ||| |||||||| ||||| Sbjct 1806689 GGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGT 1806630 Query 45313 CAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343 || ||||| || || || ||||| |||||| Sbjct 1806629 GAGGGTCTTGACGAAAATCTGCATCTTGCCT 1806599 >seq5 Length=10013798 Score = 122 bits (134), Expect = 7e-23 Identities = 153/209 (73%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || || |||||||||||||| |||||||||||| ||| || |||| || | Sbjct 3224864 CAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCGTCCTCGA 3224805 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 | || || |||||||| |||| ||||| |||||||| || | |||||||||||| || Sbjct 3224804 GCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAA 3224745 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || ||| || | | ||||| |||||||||| || |||||||||| Sbjct 3224744 TCTTGCTCTTTACGTTGTCGATTGTGTCCGACGATTCCACCTCCAACGTGATCGTCTTGC 3224685 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATG 45337 | |||| ||||| || ||||| |||||| Sbjct 3224684 CGGTCAACGTCTTGACGAAGATCTGCATG 3224656 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| |||||||||||| |||| || |||| || || || Sbjct 3224404 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCCTCGAGCTG 3224345 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || ||||| || || | ||||||||||||||||| | |||||||||||| ||| || Sbjct 3224344 CTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTT 3224285 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | ||||| | ||||||||| | ||| || ||||||||||| Sbjct 3224284 CGACTTGACATTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGT 3224225 Query 45313 CAGAGTCTTCAC 45324 || ||||| || Sbjct 3224224 GAGTGTCTTGAC 3224213 Score = 104 bits (114), Expect = 2e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| |||||||||||| |||| || |||| || || || Sbjct 3224632 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCCTCGAGCTG 3224573 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || ||||| || || | || || ||||| || || | |||||||||||| || || Sbjct 3224572 CTTGCCGGCAAAGATGAGGCGTTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTT 3224513 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 |||||| | | ||||| ||||||||| | ||| || ||||| || || Sbjct 3224512 CGACTTAACATTATCGATTGTGTCCGACGACTCCACCTCGAGGGTGATGGTCTTTCCAGT 3224453 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| ||||||||||||||| Sbjct 3224452 GAGCGTCTTGACAAAGATTTGCATG 3224428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074838876575